Entry |
|
Symbol |
addA
|
Name |
(GenBank) ATP-dependent helicase/nuclease subunit A
|
KO |
K16898 | ATP-dependent helicase/nuclease subunit A [EC:5.6.2.4 3.1.-.-] |
|
Organism |
cpat Clostridium pasteurianum DSM 525 = ATCC 6013
|
Brite |
KEGG Orthology (KO) [BR:cpat00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:cpat03400]
CLPA_c22110 (addA)
Enzymes [BR:cpat01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLPA_c22110 (addA)
DNA repair and recombination proteins [BR:cpat03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CLPA_c22110 (addA)
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
complement(2369853..2373806)
|
AA seq |
1317 aa
MMGNNWTEEQIEAIETRGCNLLVAAAAGAGKTAVLVERIIKMITDREKPVDIDRLLVVTF
TNAAAAEMRERIANELSRKLFEEPESKLLQRQLVLLNKARITTIHSFCLDVIRNYFQLID
LDPKFRIADDTETVLLKNETIEELFDKKYQEENNEDFLNLVECYCSNRDDSALMEITIFL
YNFAKSSPYPKEWICKASEVFNIKEDFNFQNSIWVKSILSGTMIELEGISKMIEKSLRII
NNEETLKAYLETYEDDLSMINNLIRESKISWNNFIDYLRNVKFLSLKRCGKDVDKDKKEQ
VQKIRDKYKKQIKDIQEEILNSIGEKVLIHIKELYPMMKCLGELVLEFDRKYIEKKRLRG
LIDFNDFEHLTLEILTDKEENGKVIPSKAALELKERYEEILIDEYQDSNLVQEVILSTIS
RSESKNPNMFMVGDVKQSIYRFRQAKPELFLRKYSNYSSEAGAKDRKILLFKNFRSRKTV
LDGVNYIFKAIMSENIGELNYDEKEELKASAEFKEINREEFTELGVNEIHIIEKNKNQNN
INKELVLIDQEEEQENIDNIRLEARMAALRIKELVSKRDKSYAVFDKGLGDYRSVQYKDI
VILLRATTNWSSTFVEELKNFDIPVFSDTGTGYFETTEIKTILSLLQIIDNPLQDIPLLS
VLRSPIASFTDEELIDIRSINRNIKFYEAMNIIVDRYNDLFNKNLEIIYAENDDYNENRF
EHLKEILDNTSKEEIYAEYDDATKDIDEYIKIDRENSISKPLTKKCCDFINKLKQFRSLS
IHMPIDEFIWYLYSETGYYSYAGAMPSGIQRQANLRILFQRAKSYENTSYKGLFNFINFI
NKLKISSKDMGSAKILGENENVVRIMSIHKSKGLEFPVVILSGCGKNFNLRDITNQILFH
HELGIGPDYVNFRRRISYPTIFKNVIKKKIKFENLSEEMRILYVALTRAKEKLIITGAVN
NIENASKNWSEDIDNLEDKISENIILKGKSYLDWIGPAIIKHRDGKILREVANISISDVC
NIHSESNWKIKLWNREKILKEDRKSVEEVYNNKNDVEDKNLNKIDIIKEILLEIENKEPR
TPYYDEINRRLSWEYKYNFLKGIPSSISVTELKRQQNSQDEYSRNVFPPVLKKRPIFLEE
KKDLTPAEKGTAMHAVMQRLDFNLPVTEESIKEQVYRMVSREFITEKQAETIDIGKIERF
FQSNLGKRMLSAENIKREIPFVMRLKVSEVYRELPEDSCKDEIIVLQGAMDCYFEEEDGL
VIVDYKTDYVTDKNIDIVVEKYKNQIKYYAEALRKITDKIVKEQYLYLFYNGSIVKI |
NT seq |
3954 nt +upstreamnt +downstreamnt
atgatggggaataattggactgaggaacagatagaagctattgaaaccaggggatgcaat
ttgttagtagctgctgctgctggagcgggaaagacagcagtacttgtagagagaataata
aaaatgattacagatagagaaaagcctgtagatatagataggcttttagtagttactttt
accaatgcagcagcagcagagatgagagagaggatagctaatgaactatcgaggaaactt
tttgaggagccagaatcaaagctcttgcagaggcaattagtacttctgaataaagcaaga
attactacaattcattccttttgtttggacgtaataagaaattattttcaacttatagat
ttagatcctaaatttagaatagcagatgatacagaaactgtattattgaagaatgaaact
atagaagaactctttgataaaaaatatcaagaggaaaataatgaagattttttgaactta
gtagaatgttattgttctaacagagatgattcagctctcatggaaataacaatttttctt
tacaattttgcaaaaagcagcccttatccaaaggagtggatttgtaaagcaagcgaagtt
tttaatataaaagaagattttaattttcaaaattctatttgggtaaagtcaattttatct
ggcactatgatagaacttgaaggtataagtaaaatgatagaaaaatctttaagaattatc
aataatgaggaaactttaaaagcctatttagagacttatgaagatgatctatcaatgata
aataatttaataagagaaagcaagatttcatggaataattttatagattatctaaggaat
gtgaaatttttatctcttaaaagatgtggaaaagatgtagataaggataaaaaagaacaa
gtacagaaaataagagataaatataaaaagcagataaaagatatacaagaagaaatacta
aattctattggtgaaaaggtattaattcatattaaagaactatatccaatgatgaaatgc
ctaggagaattagttctagagtttgacagaaaatatattgagaaaaagcggctcaggggt
ttaatagattttaatgattttgaacatctcacccttgaaatacttacggataaagaggaa
aatggaaaagtaattccgtctaaggcagctttggagcttaaagaaagatatgaagaaatc
ctaatagatgaatatcaggatagtaacttagttcaggaagttatattaagtacaatatca
agaagtgaaagtaaaaatccaaatatgtttatggtaggagatgtaaagcaaagtatatat
agatttagacaggcaaaaccagaactttttcttcgtaaatattctaattattccagtgaa
gcaggagcaaaagatagaaaaatacttttgtttaaaaattttagaagcagaaagactgtg
ttagatggagttaattatatatttaaagctataatgtctgaaaatataggagaacttaat
tatgatgaaaaggaagaactaaaggcatcagcagaattcaaagaaataaatagagaagaa
tttactgaactaggagtaaatgaaatacatataattgaaaagaataaaaatcaaaataat
atcaataaagagcttgtattaatagatcaggaagaagaacaagaaaatattgataatata
cggcttgaagccaggatggcagctttgagaataaaagaattggtatctaaaagagataaa
tcttatgctgtttttgataaggggcttggtgattataggagtgttcagtataaggatata
gtaatactgctgcgagctaccacaaattggtcatcaacttttgtagaagaattgaaaaat
tttgatatacctgtattttcagatactggtactggttattttgaaaccacagaaataaaa
actattctttcattgcttcaaataatagataatcctcttcaagatatacctcttctttca
gtattgagatcccctatagcttcttttaccgatgaagagcttattgatataaggtcaata
aataggaatattaaattttatgaagctatgaatattatagtggacagatataatgattta
tttaataaaaatttagaaattatttatgctgaaaatgatgattacaatgaaaatagattt
gagcatttaaaagagattttagataatactagcaaagaagaaatttatgcagagtatgat
gatgcaactaaagatattgatgaatatataaaaatagatagagaaaatagtataagtaag
ccattaactaaaaaatgttgtgattttataaacaaacttaaacagtttagaagtttatct
attcatatgcctatagatgaatttatatggtatttatattcagaaacaggttattacagt
tatgcaggagctatgccatcagggattcaaagacaggcaaatttaagaatactatttcag
agggcaaaatcttatgaaaatacaagttataaagggttatttaactttataaactttata
aataaattgaaaataagcagtaaagatatgggaagtgctaaaatattaggtgagaatgaa
aatgtagtaaggataatgagtattcataaaagtaagggattagaatttccagtggttatt
ttatctggttgtggcaaaaattttaatttgcgtgatattacaaatcaaatattgtttcat
catgaacttggtataggaccagattatgttaattttaggagaagaatatcctatcctaca
atatttaaaaatgtcattaagaaaaaaataaaatttgaaaatctttctgaggagatgaga
atactctatgtagcacttactagagcaaaagaaaagctcataataacaggtgctgtaaat
aatattgaaaatgctagtaaaaattggtcagaagatatagataatttagaagataagata
tcagaaaatataatattaaaaggaaaaagctatttagactggataggccctgctattata
aagcatagggatggaaaaattctaagagaagtggcaaatatatctatatcagatgtatgc
aatatacacagtgaatctaactggaaaataaagctatggaatagagagaaaatattaaag
gaagataggaagtctgtagaagaagtttataataataaaaatgacgttgaagataaaaat
ttaaataaaatagatattattaaagaaattcttttagaaatagaaaataaagagccaagg
acaccttattatgatgaaataaataggagacttagctgggaatacaaatataatttttta
aaaggtattccttctagtatatctgtaacagaactaaaaagacaacaaaactcccaggat
gaatattcaagaaatgtatttccgccagtacttaaaaaaagaccaatatttttagaagag
aaaaaagaccttaccccagcagagaaaggaacagctatgcatgctgtaatgcaaagacta
gattttaatttacctgtaacagaagaaagtataaaagagcaagtatacagaatggtttca
agagaatttataacagaaaaacaagctgaaactatagatataggcaaaatagaaaggttt
tttcaaagtaatcttggaaagagaatgttatctgctgaaaatataaaaagagaaattccc
tttgtaatgagattaaaagtttcagaagtatatagagaattacctgaagatagttgtaaa
gatgaaataatagtattacaaggagccatggattgctattttgaagaagaagatggtttg
gttatagtagattataaaacagattatgttacagataaaaatatagatattgtagtagaa
aaatataaaaatcaaataaaatattatgctgaagcacttagaaagattacagataaaata
gttaaagaacagtatctatatttattctataatggaagcattgttaaaatttaa |