Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c22310
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Entry
CLPA_c22310 CDS
T03753
Symbol
ruvB
Name
(GenBank) holliday junction ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CLPA_c22310 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpat03400
]
CLPA_c22310 (ruvB)
Enzymes [BR:
cpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLPA_c22310 (ruvB)
DNA repair and recombination proteins [BR:
cpat03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CLPA_c22310 (ruvB)
RecFOR pathway proteins
CLPA_c22310 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
TIP49
Mg_chelatase
nSTAND3
RNA_helicase
ResIII
AAA_16
AAA_2
Bac_DnaA
NTPase_1
AAA_22
MCM
bpMoxR
NB-ARC
AAA_14
AAA_18
AAA_24
AAA_3
TsaE
Parvo_NS1
Sigma54_activ_2
AAA_17
DUF815
AAA_28
IstB_IS21
ABC_tran
Resolvase
NACHT
AAA_11
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AJA52289
UniProt:
A0A0H3J2Z8
LinkDB
All DBs
Position
complement(2396970..2398013)
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AA seq
347 aa
AA seq
DB search
MEERIVSSVNLNEDLDVEYSLRPQRLKEYIGQNKVKEKLSIFVKAAKKRKEALDHVLFYG
PPGLGKTTLANIIAREMKGNLKITSGPAIERAGDLAAILTSLSEFDVLFIDEIHRLNRSV
EEILYPAMEDYALDIVIGKGAAAKSIRLDLPKFTLIGATTRVGLLTSPLRDRFGVMCPME
FYKDEELKEIIVRSSSILKVGIEEKAALEIARRSRGTPRIANRLLKRVRDYSEVMGNGTI
DIPSSEKALELLEIDKEGFDKIDNKILEAIVDNFNGGPVGLETLAYFIGEELDTLDDVYE
PYLLQKGFIMRTPRGRVATDKTYKHLNRPISSDRNYTQCSVFKENRK
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaggattgtaagttctgtaaatttaaatgaagacttagatgtagaatatagt
ttaagaccccaaagattaaaagaatatatagggcaaaataaggtaaaggaaaagctcagt
atatttgtaaaggcggcaaaaaagagaaaagaagctttagatcatgttttattttatgga
cctccgggacttgggaaaactactcttgcaaatattattgcaagggaaatgaagggaaat
cttaaaataacttcaggaccggctatagaaagagctggagatttagctgctatattgact
agtctatctgaatttgatgtattatttatagatgaaattcatagacttaatcgaagtgtg
gaagagatattatatcctgctatggaggattatgctttagatatagttataggtaaagga
gcggctgctaagtctataagattagacttgccaaaatttactctaattggagctactact
agagttggacttttaacttcacctcttagggataggtttggagtaatgtgtcctatggag
ttttataaagatgaagaacttaaagagataattgtcagatcatcttcaatattaaaagta
ggtatagaggaaaaagcagctcttgaaatagcaagacgttctaggggaactccaagaatt
gccaataggcttttaaagagagttagagattattcagaagtaatgggaaatggaactatt
gatattccttcttcagaaaaagctttggaactattggaaatagataaagaaggttttgat
aaaatagataataaaattttggaagctatagttgataatttcaatggtgggccagtagga
cttgagaccttagcttactttataggggaggaactggatactttagatgatgtttatgaa
ccttatttacttcaaaaaggatttataatgagaactccaaggggaagagtggctacagat
aaaacttataagcatttaaatagacctataagttctgatagaaattatactcagtgttct
gtatttaaggaaaataggaaatag
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