Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c23210
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Entry
CLPA_c23210 CDS
T03753
Symbol
holA
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03030
DNA replication
cpat03430
Mismatch repair
cpat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLPA_c23210 (holA)
03430 Mismatch repair
CLPA_c23210 (holA)
03440 Homologous recombination
CLPA_c23210 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpat03032
]
CLPA_c23210 (holA)
03400 DNA repair and recombination proteins [BR:
cpat03400
]
CLPA_c23210 (holA)
Enzymes [BR:
cpat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLPA_c23210 (holA)
DNA replication proteins [BR:
cpat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLPA_c23210 (holA)
DNA repair and recombination proteins [BR:
cpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLPA_c23210 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Bet_v_1
Motif
Other DBs
NCBI-ProteinID:
AJA52379
UniProt:
A0A0H3J388
LinkDB
All DBs
Position
complement(2491983..2493011)
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AA seq
342 aa
AA seq
DB search
MINFLDLDSRIKKTIDNFYIFCGHNEQMIKDSIKKIVKLSVNNDFLDLNYFEFDGVAVTY
EEIINSCETLPFMSDNKVIVVYRADFLSDRTKHINKNGDTILKKLKKYSEDFPKQSILIM
YYVFDNDREKISSKVKRLDKNACVVEFTKLKGVMLQNKVKEIFNEKGKNIDRTNLSFFCS
EVENNMDIIKNEVDKLCCYTEGRNIEKQDILDLLPQKSDNDIFNLVDFLSQRRPERAIEV
LSELIYKGEKATNILSMIERQFRIMMNLKIGMENKRGKEELAKEYRLHPFICEKMMRQCQ
KYTLEQIIKSEEICIETERELKSQGSNERVKLELLIIKSAMV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgattaattttttagatttagacagtagaataaaaaagacaatagataatttttatata
ttttgtggtcataatgaacagatgataaaagatagtattaaaaaaattgttaagctttca
gtaaataatgattttttagatttaaattattttgaatttgatggagtggctgtaacttat
gaagaaataattaattcctgtgaaacgttgccttttatgagtgataataaagttatagtt
gtctatagggcagattttctttctgacagaactaagcatataaataaaaatggagatacc
atattaaaaaaattaaaaaagtatagtgaggatttcccaaaacaaagtatattaattatg
tattatgtttttgataatgatagggaaaaaatcagtagtaaagtaaaacggttagataaa
aatgcttgtgtagtagaatttactaaattaaaaggtgttatgcttcaaaataaagtaaag
gaaatatttaatgagaaagggaaaaatattgacagaactaatttaagttttttctgcagt
gaagttgaaaataatatggatataattaaaaatgaggtagataagctttgttgttatacg
gaaggaagaaatattgaaaaacaagatattttagatcttcttccacaaaaaagtgataat
gatatttttaatcttgtggattttttatctcaaagaagaccggaaagagctatagaagtt
ttatcagagcttatttataagggagaaaaagctacaaatattttatcgatgatagaaaga
caatttagaattatgatgaatttaaaaattggtatggagaataaaaggggaaaggaggag
ctagctaaagaatataggcttcatccctttatatgcgaaaagatgatgagacaatgtcaa
aaatacacgttggaacaaataataaaatcagaagaaatatgtattgaaactgaaagggaa
ctaaaaagtcaaggaagtaatgaaagggttaaattagaattgcttataataaaaagtgct
atggtttag
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