Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c27100
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Entry
CLPA_c27100 CDS
T03753
Symbol
degA
Name
(GenBank) HTH-type transcriptional regulator DegA
KO
K02529
LacI family transcriptional regulator, galactose operon repressor
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpat03000
]
CLPA_c27100 (degA)
Transcription factors [BR:
cpat03000
]
Prokaryotic type
Helix-turn-helix
LacI family
CLPA_c27100 (degA)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
LacI
Peripla_BP_1
HTH_3
CENP-B_N
TnsD
Trp_repressor
HTH_38
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AJA52765
UniProt:
A0A0H3J6G5
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All DBs
Position
2897529..2898518
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AA seq
329 aa
AA seq
DB search
MNIYDIAKEAGVSITTVSRVLNNKENISKKTKEKVQSILNKYNYTPNAIARGLVAKSMKS
IGVVTTDITDIHHGNTAYIIEREFNKIGYNVILCNTGGKTMESINYIKMLSERNIDGIIL
MGSVFNDDDIKSSMASYINNIPMVIINGFLNIENTHSILVDDAYGISLCVDHLINSGHRD
IVYVKDQNTYSANQKKEGFIMGMNKNNLSIDDNSIINVKKGLEGGADAVEKLIQLNKKFS
AIIFGEDITAIGGIKKLRSLGLHIPKDVAITGFNNSIFARCCYPELTSVDNKVETTSSLS
VKLLTDLIEKKNVASNILVRPDLVIRESS
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgaatatatatgacattgcaaaagaagcaggagtttccataacaacagtatctagagtc
ctcaataataaagagaatataagtaaaaagacaaaagaaaaagtccaatctatattaaat
aaatataattatacgcctaatgctatagcaagaggtttagtagccaaatccatgaaatca
ataggtgtagtaactacagatattacagatatacatcatggaaataccgcttatataatt
gaaagagaattcaataaaataggatacaatgtaattctctgcaatactggtggaaaaact
atggagagtattaattatattaaaatgttatcggaacgaaatatagatggaattatattg
atggggtcggtatttaacgatgatgatataaaatcttccatggcttcctacattaataat
attcccatggttattataaatggtttcttaaatatagaaaatacacactcgatattagta
gatgatgcttatggcataagcctttgtgtagatcatttgattaatagtggtcacagagac
attgtatatgtaaaagatcaaaatacctacagtgccaatcaaaaaaaagaaggctttata
atgggtatgaataaaaataatctttctatagatgataattctataataaatgtaaaaaag
ggattagaaggaggagctgatgctgtagaaaaactcatccaactaaataaaaaattttca
gctataatattcggtgaagatataactgctattggaggcataaagaaactcagatctttg
ggtcttcatattccaaaagatgtggccattacaggttttaacaattctatttttgctaga
tgctgttatcctgaattgacctccgtagataataaggtagaaactaccagttccttgagc
gttaaactattaacagatcttatagaaaagaaaaatgtagcatcgaatatattggttcgt
ccagatttagtaattagggaaagtagctaa
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