Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c27670
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Entry
CLPA_c27670 CDS
T03753
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03030
DNA replication
cpat03430
Mismatch repair
cpat03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CLPA_c27670 (dnaE)
03430 Mismatch repair
CLPA_c27670 (dnaE)
03440 Homologous recombination
CLPA_c27670 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpat03032
]
CLPA_c27670 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpat03400
]
CLPA_c27670 (dnaE)
Enzymes [BR:
cpat01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CLPA_c27670 (dnaE)
DNA replication proteins [BR:
cpat03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CLPA_c27670 (dnaE)
DNA repair and recombination proteins [BR:
cpat03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CLPA_c27670 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
MotCF
Motif
Other DBs
NCBI-ProteinID:
AJA52822
UniProt:
A0A0H3J5V5
LinkDB
All DBs
Position
complement(2954456..2957959)
Genome browser
AA seq
1167 aa
AA seq
DB search
MEKESSHKDFVHLHVHTEYSLLDGSGKIKKLVSRAKELGMKSLAITDHGAMYGVVDFYKA
AKEAGIKPIIGCEVYVAGKSMHIKHPDKENETYHLVLLVKNEEGYRNLMQIVSSASIEGF
YYKPRVDHDFLKQHSSGIIALSACLGGEVQSKILKKSREAAVEAALFYKNIFKDGFYLEL
QYHGIDEQLRVNEELVNMSKELEIPLVATNDVHYIDKRDYKSHDVLLCIQTGKTVNEENR
MRYASDEFYLKSPEEMYKQFSYVQEAMDNTCKIAQECNFDYKFHESKLPNFPLKEGLDHF
EYMKALCYEGLKKRYNPVTDELTGRLDYELKIIKEMGYVDYFLIVWDFIRFARENGIMTG
PGRGSGAGSIVAYTLGITKIDPIKYNLIFERFLNPERVSMPDIDSDFCYERRQEVIDYVV
EKYGKNNVSQIVTFGTMAARACIRDVGRAMDYSYAEVDKIAKMIPSMLNITIDKALEINQ
ELKQIYEEDDRIKTLIDISRDLEGLPRHTSTHAAGVVIASQPLVNYVPLLRNEDAIVTQF
TMNTLEELGLLKMDFLGLRTLTVLRDAVNMIRDNKGVKIDLDSIDFNDEKVYKMIGEGKT
VGVFQLESPGMTSFMKELKPDNFEDIIAGISLYRPGPMKEIPRYVKNKNDPEGEEYITPE
LEHILNVTYGCMVYQEQVMQIVRDLAGYSMGRSDLVRRAMSKKKHHVMEEERRNFIYGIT
DDEGNIEVAGCLRNGISETAANKIFDSMMDFASYAFNKSHAAAYAVVAYETAYLMKYYPT
EFIAAMLNSVMGNNEKVAYYVRFAKEINTELLPPDINESFSKFTVKNEKIRFGMAAVKNV
GVNVIESIVKSRNEKGKFINFVDFCNKVDIGIVNKRAVESLIKVGAFDYFKIYRSRLLAV
YEKVMDGISNQRKKNIDGQISLFGNYQMNSENSYSDMDVKYPDIKEFQKKYILTMEKEMT
GLYISGHPLDEYKETLDASVNTNISDIVIAESLEEVNSSENYKVKDGDRVVIGGILTEVT
KKITRNNSMMAFCKIEDMYASVEVIIFPNVLEKFKILIKEDEMIILKGRVSIREDEQPKI
ICEDIKPLVKINSSKVYIQIEDENQVVNTIKEIENFLSEFKGSTPIYICTRKERKKFMLP
SSLWIKEDIEILNFLRKRFGEENLKVC
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atggagaaggagagttcacataaggattttgttcatctccatgtacatacagagtatagt
cttttagatggttctggtaagataaaaaaattggtttcaagggctaaagaacttggaatg
aaaagtcttgctataacagatcatggtgctatgtatggagtggtggatttttataaagct
gctaaagaagctgggataaaaccaattataggctgtgaagtatatgtagcaggaaaatct
atgcatataaaacatccagataaagaaaatgaaacttatcatcttgtattattggtaaaa
aatgaagagggctacaggaacctaatgcagatagtgtcttctgcttccattgaaggattt
tattataagcctagagtagatcacgattttttaaaacagcacagcagtggaataattgct
ctaagtgcttgtttgggaggagaagtacaatctaagattttaaagaaaagtagggaagct
gcagtagaagctgctcttttttataaaaatatatttaaagatggattttatcttgaacta
caatatcatggaattgatgaacagctgagggtaaatgaggaactggtaaatatgtcaaaa
gaactggaaatcccccttgtagctaccaatgatgtacactatatagataaaagagattat
aaatctcatgatgtccttctatgtattcaaacaggaaaaactgtcaacgaggaaaataga
atgagatatgcttctgatgaattctatttaaaatctccagaagagatgtataaacagttt
tcctatgtacaagaagctatggataatacctgtaaaattgcacaagagtgcaattttgac
tataaatttcatgaatcaaaattgcctaattttccattaaaagaaggattagatcatttt
gagtatatgaaagccctttgttatgagggactaaaaaagagatataatcctgtaacagat
gagcttacaggtagactggattatgaacttaaaataataaaagaaatgggatatgtggat
tattttttaatagtatgggattttataagatttgccagagaaaatggtataatgacaggg
ccaggaagaggcagtggagcaggttctatagtagcctataccctaggaattactaagata
gaccctataaaatataatcttatttttgaaagatttttgaatccagagagagtatctatg
cccgatatagactctgatttttgttatgaaagacgtcaggaagttatagattatgtggta
gagaagtatggtaaaaataatgtttcacaaattgttacctttggaactatggcagcaagg
gcttgcataagagatgtaggaagagcaatggattattcctatgcggaagtggataaaata
gctaaaatgataccctctatgttgaatattaccattgataaagcgcttgaaatcaatcag
gagttaaaacaaatctatgaggaagatgatagaattaaaactcttattgatatttcaaga
gatttggaagggcttccaagacatacatcaacccatgctgcgggagtggttatagcatcg
cagcctttagtaaattatgtaccacttcttagaaatgaagatgccatagtaactcaattt
actatgaatacgttagaggaacttggattattgaagatggattttttaggactgagaaca
cttacagttttaagagatgctgtaaatatgataagggataataaaggggtaaaaatagac
ttagattctatagactttaatgatgaaaaagtatataagatgattggagaaggtaaaaca
gttggagtatttcaattggaatctccgggaatgacaagttttatgaaagaacttaaacca
gataattttgaggatataatagccggtataagtctttatagacctggtcccatgaaagag
ataccaaggtatgtaaaaaacaaaaatgatccagagggagaagaatatatcacaccagaa
ctagagcacatattaaatgttacctatggctgtatggtttatcaggaacaggttatgcag
atagttagggatcttgcaggatattccatgggaagaagtgatctggtaagacgtgctatg
tcgaaaaaaaagcatcatgtaatggaagaggaaaggcgtaattttatatatggaattaca
gatgatgagggaaatatagaagtagcaggatgtcttagaaatggtatttcagaaacagct
gctaataaaatatttgattctatgatggactttgcaagctatgcttttaataaatctcac
gcagcagcttatgcagtagtagcctatgaaactgcatatcttatgaagtattatccaaca
gaatttatagctgctatgcttaacagtgtaatgggaaataatgaaaaggtagcatattat
gtaagatttgcaaaagaaatcaatacagaacttttaccgccagatataaatgaaagcttt
tcaaaatttactgttaaaaatgaaaaaatacgttttggaatggctgcagttaaaaatgta
ggtgttaatgtaatagagagtatagttaaatctagaaatgaaaaaggtaaatttataaac
tttgttgatttttgtaacaaagtcgatattggaatagtaaataaaagagcagttgaaagc
ctcataaaggtaggagcttttgactattttaaaatatataggtcaagacttttagcggtt
tatgaaaaagtaatggatggaatcagtaatcagagaaagaaaaatattgacggacagata
agcttatttggtaattatcaaatgaatagtgaaaattcttatagtgatatggatgtaaag
tatccagatattaaagaatttcaaaaaaaatatatattgacaatggaaaaagagatgacc
ggtctctatatatcgggacaccctttagatgaatataaagaaactttagatgcttcagta
aatacaaatatatcagatatagtaattgcagaatctttggaagaagtaaattcctctgaa
aactataaggttaaagacggggatagagtagttataggcggcatattgacagaggtaaca
aagaaaataaccagaaataactccatgatggcattttgcaaaattgaagatatgtatgct
tccgtagaagttataatttttcctaatgtacttgaaaagtttaaaattcttataaaagaa
gatgagatgataatactaaagggacgggtaagcataagagaagatgaacaacctaaaatt
atatgtgaggatataaaaccattggtaaagataaatagttctaaggtttatattcaaatt
gaagatgaaaatcaggttgtaaatactataaaagaaatagaaaattttctttcggaattt
aaaggtagtacgcccatatatatatgtactaggaaagaaagaaaaaagtttatgcttccc
agcagtttatggataaaagaggatatagagatattaaactttttgaggaagagatttgga
gaggaaaatctaaaagtatgttaa
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