Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c28520
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Entry
CLPA_c28520 CDS
T03753
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLPA_c28520 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpat03019
]
CLPA_c28520 (groL)
03110 Chaperones and folding catalysts [BR:
cpat03110
]
CLPA_c28520 (groL)
03029 Mitochondrial biogenesis [BR:
cpat03029
]
CLPA_c28520 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpat04147
]
CLPA_c28520 (groL)
Enzymes [BR:
cpat01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CLPA_c28520 (groL)
Messenger RNA biogenesis [BR:
cpat03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CLPA_c28520 (groL)
Chaperones and folding catalysts [BR:
cpat03110
]
Heat shock proteins
HSP60 / Chaperonin
CLPA_c28520 (groL)
Mitochondrial biogenesis [BR:
cpat03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CLPA_c28520 (groL)
Exosome [BR:
cpat04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CLPA_c28520 (groL)
Exosomal proteins of other body fluids (saliva and urine)
CLPA_c28520 (groL)
Exosomal proteins of breast cancer cells
CLPA_c28520 (groL)
Exosomal proteins of colorectal cancer cells
CLPA_c28520 (groL)
Exosomal proteins of bladder cancer cells
CLPA_c28520 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DUF7342
Motif
Other DBs
NCBI-ProteinID:
AJA52906
UniProt:
A0A0H3J9R6
LinkDB
All DBs
Position
complement(3055112..3056743)
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AA seq
543 aa
AA seq
DB search
MAKSILLGEEGRRSMQAGVDKLANTVKVTLGPKGRNVVLDKKFGSPLITNDGVSIAREIE
LEDPYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPMLIRTGIN
KAVEETIKNLKELSKPINGKEDIARVAAISASDPNIGKLIADAMEKVGNEGVITVEESKS
MGTELDIVEGMQFDRGYLSAYMVTDTEKMEAALDDPYVLITDKKISNIQEILPLLEQIVQ
QGKKLLIIAEDIEGEALTTLVVNKLRGTFTCIGVKAPGFGDRRKDMLKDIAILTGGEVIS
DELGKDLKDVTLDELGRAESVKVTKENTTIVNGRGSKEEIKDRVAQIKTQIEDSTSDFDT
EKLKERLAKLAGGVAVVKVGAATETELKERKLRIEDALAATKAAVEEGIVPGGGTAYLNI
LPEVKKITDEDPDVQVGINIIVKALEEPVRQIAANAGLEGSVIIEKVINSEKGIGFDALR
ERYVDMIKEGIVDPTKVTRSALQNAASVASTFLTTEGVVADIPEKNPAPMPGGAPGMGMD
GMY
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaagcatattattaggtgaagaaggcagaagatctatgcaggcaggtgtagac
aaacttgcgaatacagttaaggtaacacttggaccaaaaggcagaaacgtagttttagat
aaaaaatttggatcaccacttataactaatgatggtgtaagtattgcaagagaaatagaa
ttagaagatccatatgaaaacatgggagctcaacttgtaaaagaagttgctacaaaaact
aatgacgtagcaggagatggtactacaacagctacactattagcacaggctataataaga
gaaggattaaaaaatgttacagcaggtgctaatccaatgcttataagaacaggtataaat
aaagctgttgaagaaactattaaaaatctaaaggaactttcaaaacctataaatggaaaa
gaagacatagctagagttgcagctatttcagccagtgatccaaatattggaaaacttata
gcagatgctatggaaaaggttggtaacgaaggagttatcactgtagaagaatcaaaatct
atgggaacagaattagacatagttgaaggtatgcaatttgatagaggatatttaagtgct
tacatggtaactgatacagaaaagatggaagcagctcttgatgatccatatgtacttata
acagataagaaaatttcaaacatacaggaaatacttccactattagaacaaatagttcaa
cagggaaagaagcttttaatcatagctgaagatatcgaaggagaagctcttacaacactt
gttgtaaataaattaagaggtacatttacatgcataggtgttaaagctcctggtttcgga
gatagaagaaaagatatgcttaaagatatagctattttaactggtggagaagttatatca
gatgaacttggaaaagatcttaaagatgtaactttagatgagcttggaagagctgaaagc
gttaaagttacaaaagaaaacactacaattgtaaatggcagaggtagcaaagaagaaatt
aaagacagagttgctcaaataaaaactcaaattgaagattcaacttcagattttgatact
gaaaaattaaaagaaagacttgcaaaacttgcaggaggagttgcagtagtaaaagtagga
gctgctactgaaacagaacttaaggaaagaaagcttagaatagaagatgcacttgcagca
acaaaagcagctgtagaagagggaatagttcctggtggtggtacagcttacttaaatata
ctaccagaagttaagaaaattactgatgaagatccagacgttcaagttggaattaacata
atagtaaaagctcttgaagagcctgtaagacaaatagcagcaaatgctggacttgaaggt
tctgttataatagaaaaagttataaacagtgaaaagggtattggttttgatgctcttcgt
gaaagatatgtagatatgataaaagaaggaattgtagatccaactaaagttacaagatct
gcacttcaaaatgctgcatctgtagcttcaacattcctaacaactgaaggtgtggttgca
gatatacctgaaaagaatcctgcaccaatgccaggtggagctcctggaatgggaatggac
ggaatgtactaa
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