Clostridium pasteurianum DSM 525 = ATCC 6013: CLPA_c35170
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Entry
CLPA_c35170 CDS
T03753
Symbol
hemD
Name
(GenBank) porphyrin biosynthesis protein HemD
KO
K13542
uroporphyrinogen III methyltransferase / synthase [EC:
2.1.1.107
4.2.1.75
]
Organism
cpat
Clostridium pasteurianum DSM 525 = ATCC 6013
Pathway
cpat00860
Porphyrin metabolism
cpat01100
Metabolic pathways
cpat01110
Biosynthesis of secondary metabolites
cpat01120
Microbial metabolism in diverse environments
cpat01240
Biosynthesis of cofactors
Module
cpat_M00924
Cobalamin biosynthesis, anaerobic, uroporphyrinogen III => sirohydrochlorin => cobyrinate a,c-diamide
Brite
KEGG Orthology (KO) [BR:
cpat00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
CLPA_c35170 (hemD)
Enzymes [BR:
cpat01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.107 uroporphyrinogen-III C-methyltransferase
CLPA_c35170 (hemD)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.75 uroporphyrinogen-III synthase
CLPA_c35170 (hemD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEM4
TP_methylase
DUF2325
HEPN
Motif
Other DBs
NCBI-ProteinID:
AJA53565
UniProt:
A0A0H3J8M4
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Position
complement(3781769..3783256)
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AA seq
495 aa
AA seq
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MNGMVYIIGAGSGDEKLVTLKAIECIKKADVIVYDRLINPNLLDYAMESAEKIDAGKKAG
NHTIPQAHINEILAEKAKEGSCVVRLKGGDPFVFGRGGEEAIHLFKEGIEFEIVPGISAV
NAVTAYAGIPVTHRNISSSFHVITGHENPSKEEEAIDYKVIAKLSGTLVFFMGLNNLETI
CKNLIKYGKEEDTPVAVISNGTLKNQKTVCGTLKNITDFRDEMESPALIVVGYVVPLRKY
LNWFENKTFYGKKVLVTRAKNQSEKICSKLKTINATPVSLPTIEIKDNINIHKNIYEHIE
KYDWIVFTSENAVRIFIKGLIQYRGDIRAISKAKIAVIGSSTEKVLNSHYLKAEVSPKEF
ESEKLALELKNRVEKGDKVLVPTSNIAHNSIPKAIKEIGAEIEVIHIYDVVTPEYKLGEL
SKIMDEIAVITFTSPSCVKGFMKIFKEENLNFKVLESKEIICIGPITARALEEADIKNYK
CAKTHNVDGIIDLVR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
ttgaatggtatggtttatataattggtgctggttccggagatgaaaaacttgtaacttta
aaggctatagagtgcataaaaaaggcggatgtaatagtatatgacagacttataaaccct
aaccttctagattatgcaatggaatcagctgagaaaatagatgcaggtaaaaaggcagga
aatcacacaatacctcaggctcatataaatgaaatattagctgagaaggcaaaggaaggt
agttgtgtagtaaggttaaaaggcggagatccttttgtgttcggaagaggcggagaagaa
gctatacatctttttaaagaaggtatagaatttgaaatagttcctggaatttcagctgta
aatgctgtcactgcttacgcaggtattcctgtaacccatagaaatataagcagttctttt
catgtaataactggacatgaaaatccatcaaaagaggaagaagctatagactataaggta
atagcaaagttatcaggaacattggtattttttatgggacttaataatttagaaactata
tgtaagaatctaataaaatatggtaaggaagaggatacccctgtagcagtaatctccaat
ggaactcttaaaaatcagaagactgtgtgtggaacattgaagaatattacagattttaga
gatgaaatggaatctccagcattaattgtagtaggctatgtagttccactgagaaaatac
cttaattggtttgaaaacaaaactttttatggaaaaaaagtacttgtaaccagagctaaa
aatcaatcagaaaaaatatgttcaaaacttaaaactataaatgccactcctgtgagtctg
ccaactatagaaataaaagataatattaatatacataaaaatatctatgaacacatagaa
aaatatgattggatagtttttaccagtgagaatgctgtaaggatatttattaaaggtctt
atacaatatagaggtgatataagggctataagtaaggcaaaaatagctgtaattggaagt
tctacagaaaaggttctaaatagtcattatttaaaagcagaagtttcgccaaaagaattt
gagtcagaaaaattggcattggaattaaaaaatagagttgaaaaaggggataaagtatta
gttccaacttcaaatattgctcataattctatccctaaagccattaaagaaataggtgcg
gaaattgaagtaatacacatatatgatgtagtgacaccagaatataaactcggtgaatta
tcaaagattatggatgaaatagctgtaattacatttaccagtccttcctgcgtaaaaggc
tttatgaaaatttttaaagaagaaaatctaaattttaaagtgcttgaaagcaaagagata
atatgtataggaccaataactgcaagggctcttgaagaagctgatatcaaaaattataaa
tgtgcaaaaactcataatgtagatggtataattgatttagtgagataa
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