Cupriavidus pauculus: EHF44_03905
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Entry
EHF44_03905 CDS
T05738
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
cpau
Cupriavidus pauculus
Pathway
cpau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
EHF44_03905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpau03400
]
EHF44_03905
Enzymes [BR:
cpau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
EHF44_03905
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
EHF44_03905
DNA repair and recombination proteins [BR:
cpau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
EHF44_03905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AZG12647
UniProt:
A0A3G8GWQ8
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All DBs
Position
1:complement(483875..484774)
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AA seq
299 aa
AA seq
DB search
MPELPEVEVTRRGLLPHVVGRRIAGVTVRHRGLRWPVEPELEARLTGRVIGRIERRGKYL
LLECLPADTRPDADGDDAAPGWLLVHLGMTGTLRVYPDAPAAGAHDHLDLELVPADPAGS
ADAGARMVLRFRDPRRFGAIIWTPLPEASLPEHPLLRRLGIEPFDPRFDGAWFHRLTRGR
SVAIKQALLAGDIVVGVGNIYCSESLFRAGIRPTTPAGRISLPRYEKLAAAVRETLTEAI
ARGGSTLRDFVGSDGSTGYFQLDCLVYDRAGEPCRVCGTPIRQIVQGQRSTFYCPHCQH
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccagaactaccggaagtcgaagtcacgcggcgcggactgctgccgcatgtggtgggc
cgccgcatcgccggggtgaccgtgcgtcaccgcgggctgcgctggcccgtggagcccgag
ctggaggcgcgcctgaccgggcgcgtgatcggccgcatcgaacggcgcggcaagtacctg
ctgctggaatgcctgccggcggacacccggccggatgccgatggcgatgacgccgcgccc
gggtggttgctcgtgcatctgggcatgacgggcacgctgcgcgtctatcccgatgcgccg
gccgccggcgcgcacgaccatctcgacctcgaactggtgccggccgatccggcaggttcc
gccgacgccggcgcccgcatggtgctgcggttccgcgacccgcgccgcttcggcgccatc
atctggacgccgctgcccgaggcgtcgctgcccgagcacccgctgctgcggcggctgggc
atcgagccgttcgacccgcgcttcgacggcgcatggttccaccggctcacgcgcggccgc
tcggtggcgatcaagcaggcgctgctggccggcgatatcgtcgtgggcgtgggcaacatc
tattgttccgaaagcctgttccgcgccggcatccggccgaccacgccggcgggccgcatc
agcctgccgcgctacgagaaactggccgccgccgtgcgcgagacgctgaccgaggcgatt
gcccggggcggcagcacgctgcgcgatttcgtgggcagcgacggcagcaccggctacttc
cagctcgactgcctggtctacgaccgcgccggcgaaccgtgccgcgtctgcggcaccccg
atccgccagatcgtgcagggccagcggtcgacgttctactgtccgcactgccagcattga
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