Cupriavidus pauculus: EHF44_12020
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Entry
EHF44_12020 CDS
T05738
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpau
Cupriavidus pauculus
Pathway
cpau03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpau00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EHF44_12020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpau03021
]
EHF44_12020
03019 Messenger RNA biogenesis [BR:
cpau03019
]
EHF44_12020
Transcription machinery [BR:
cpau03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
EHF44_12020
Messenger RNA biogenesis [BR:
cpau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
EHF44_12020
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
S1CSD-TOTE-2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AZG14100
UniProt:
A0A2N5C9B5
LinkDB
All DBs
Position
1:complement(2222801..2224063)
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AA seq
420 aa
AA seq
DB search
MHLTELKSLHVSALLEMAATLEIDNAQRMRKQELMFAILKKRAKMGETIYGDGTLEVLPD
GFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKDGERYFALVKVDKVN
GQPPEAVKNRIMFENLTPLHPNRPLTLERDIRAEENITGRIVDMIAPIGRGQRALLVASP
KSGKTVMLQHIAHAIANNHPEADLFVLLIDERPEEVTEMQRSVRGEVVASTFDEPAIRHV
QVAEMVIEKAKRLVELKRDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRF
FGAARNLEEGGSLTIIATALIETGSRMDDVIYEEFKGTGNMEVHLERRLAEKRVYPAINL
NKSGTRREELLIKPEILQKIWILRKFISDMDEVQAMEFILDKMKPTKNNAEFFDMMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcacctgacagaactcaaatcgcttcacgtgtctgcgcttctcgaaatggcggcaacg
ctcgagatcgacaacgcacaacggatgcgcaaacaggaactcatgtttgcgatcctgaag
aagcgcgccaagatgggcgaaaccatctacggagacggcacgctggaagttctgcccgat
ggcttcggtttcctgcgctcgccggaaacgtcgtacctggcgagcactgacgacatctac
atcagcccgtcgcagatccgccgcttcaacctgcataccggtgattcgatcgaaggcgag
gtccgcacgcccaaggacggcgagcgctactttgcgctggtgaaggtggacaaggtcaac
gggcagccgcccgaggcggtgaagaaccgcatcatgttcgagaacctgacgccgctgcat
ccgaaccggccgctcacgctcgaacgcgatatccgcgccgaggaaaacatcaccggccgc
atcgtcgacatgatcgccccgatcggccgcggccagcgcgcgctgctggtggcatcgccg
aagtccggcaagaccgtgatgctgcagcacatcgcccacgcgattgccaacaaccatccg
gaagccgacctgttcgtgctgctgattgacgaacggccggaagaagtgaccgaaatgcag
cgctcggtgcgcggcgaggtggtggcgtcgacgttcgacgaaccggccatccgtcacgtg
caggtggccgaaatggttatcgagaaggccaagcgcctggtggaactgaagcgcgacgtg
gtgatcctgctggactcgatcacccgcctggcgcgcgcctacaacaccgtggtgccggca
tcgggcaaggtgctgaccggcggtgtggacgccaacgcgctgcagcgcccgaagcgcttc
ttcggcgccgcgcgcaatctggaagaaggcggctcgctgaccatcatcgccacggcgctg
atcgaaacgggcagccgcatggacgacgtgatctacgaagagttcaagggcaccggcaac
atggaagtgcacctggaacgccgcctggcggaaaagcgtgtctacccggccatcaacctg
aacaagtcgggcacgcgccgcgaggaactgctgatcaagccggaaatcctccagaagatc
tggattctgcgcaagttcatctcggacatggacgaggtccaggccatggaattcatcctc
gacaagatgaagccgaccaagaacaacgcggagttcttcgacatgatgcgacgcggcggc
tga
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