Cupriavidus pauculus: EHF44_12035
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Entry
EHF44_12035 CDS
T05738
Name
(GenBank) PD-(D/E)XK nuclease family protein
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cpau
Cupriavidus pauculus
Brite
KEGG Orthology (KO) [BR:
cpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpau03400
]
EHF44_12035
Enzymes [BR:
cpau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHF44_12035
DNA repair and recombination proteins [BR:
cpau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EHF44_12035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AZG14103
UniProt:
A0A3G8H0S4
LinkDB
All DBs
Position
1:2225366..2228275
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AA seq
969 aa
AA seq
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MTRLSFPPGPSFLDQAATATWYFLDHCGPAASAAHVVVPTAAQIPGVRQALDAAARAAGQ
PRLLPRVLTLGHWLLDLPPDLDAEPRPARSHAARLLAVQQAIRAQDWLRGAFGAQTEGAA
WGLAQTLLSISDELSARWLEDAAVRDDDDIDGDDRAALLQGALQRTYAHLSERFLGQEAQ
IVLAFWQMLSGPDDPLPTRRRALQRLAQQVAGPVVWIGPTPPEPIEASFLRQAGEMVPTM
EVGYDWTGGADLPAFDTPADTPADWYRTLLALWPEARRGEGVDAAPMPALPRTLPASRPS
VRVIGSARFEDEAAAAASQLVQWLNEGRKHVALVAHDRVVARRTRALLTRAGAPVRDETG
WKLSTTRAAAALMRWFDVLVGDGDTAALLDLLKSPFCLPAADRRGAAIALLERQIRRDAL
TGGWSRLRHLFPERAGTTVVDAEAMAASDTALHVRAAARALIATLADEAAQWPRGHAQQP
LSVWLARLDATLDTLGMRAALADDDAGRQLLDALARLAELPDDETGSHASLNQQEFRAML
AALLETVAYKEPSAPGPSRITILPLNGARMRRFDGVVVVGCDDAQLPSSAAELMFFSNQM
RRELGLEDREARFAQQARDLAEVLLNNDDVVLTWQRYGSRGEPHHVSGWIERLSACCARA
GAPIEANAPQPPLETVARPSFMPAPSAPAHVPTRWSAAAYNMLRRCPYQFFAGRMLGLAG
LEVLNDDLEKRDIGNLLHRVLLQYHQEIHDAGERDDARRLARLREITDTVFGKQMADDGN
AISYYRRWCEVLPSYVAWQAAREEMGWHWRGGELDAGVDVAMPDGVPLRLAGRIDRLDKG
PDGAHAVLDYKTQPASRLRRKAGDAEEDCQLAFYGLLRADAVAGSWVALEGVKQGGRDSA
PGAQREVDLPEFQAAVTWLERQLRHDVGRLRQGAKLPAFGDAAACTYCEARGLCRKGFWE
STTLPDLKT
NT seq
2910 nt
NT seq
+upstream
nt +downstream
nt
atgacccggctttcgttccctcccggcccgtcgttcctcgaccaggccgccacggcgacg
tggtatttccttgatcactgcggcccggccgcgtcggcggcccacgtggtcgtgccgacg
gccgcgcagatccccggcgtgcgccaggcgctcgatgccgccgcgcgcgcggccggccag
ccgcgcctgctgccgcgcgtgctgacgctgggccactggctgctggatttgccgcccgac
ctcgatgccgaaccccggcccgcgcgcagccacgccgcgcggctgttggccgtgcagcag
gccatccgcgcgcaggattggctccgtggggcctttggcgcgcagaccgagggcgcggcg
tggggccttgcgcagacgctgctgtcgatcagcgacgaactgagcgcccgctggctggaa
gacgcggcggtccgcgacgatgacgacatcgacggcgacgaccgcgccgcgctgctgcag
ggcgcgctgcagcgcacctacgcgcacctgtccgagcgcttcctgggccaggaggcccag
atcgtgctggcgttctggcagatgctgtccggccccgacgatccgctgcccacgcggcgc
cgcgcgctgcaacggctggcgcagcaggtggcgggcccggtggtctggatcgggccgacg
ccgccggagcccatcgaggccagctttctgcgccaggccggcgagatggtgccgacgatg
gaagtcggctacgactggaccggcggcgccgatcttcccgccttcgatacccccgccgac
acccccgccgactggtaccgcacgctgctggccctgtggcccgaggcgcgccgcggcgaa
ggcgtcgatgccgcgcccatgcccgcgctgccccggacgctgccggccagccgccccagc
gtgcgcgtgatcggcagcgcccggttcgaggacgaggcggccgccgccgccagccagctc
gtgcaatggctcaacgaaggccgcaagcacgtggcgctggtggcccacgaccgcgtggtg
gcgcgccgcacgcgcgcgctgctgacgcgcgccggggccccggtccgcgatgaaacgggc
tggaagctgtcgaccacgcgcgccgccgccgcgctgatgcgctggttcgacgtgctggtc
ggcgacggcgacaccgccgcgctgctcgacctgctgaagtccccgttctgcctgcccgcc
gccgaccgtcgcggcgcggccatcgcgctgctggagcgccagatccgtcgtgacgcgctc
acgggcggctggtcgcgcctgcgccatctgttccccgagcgcgccgggaccacggtcgtg
gacgccgaggcgatggcggccagcgacacggcgctgcacgtgcgcgccgccgcgcgcgcg
ctgatcgccacgctggccgacgaagccgcgcaatggccacgcggccacgcgcagcagccg
ctatcggtctggctggcccggctcgacgccacgctcgatacgctcggcatgcgcgccgcg
ctggccgacgacgacgcgggccgccagttgctggacgccctggcgcgcttggccgagctg
cccgacgacgagaccggcagccacgcctcgctgaatcagcaggaattccgcgcgatgctg
gccgcgctgctggagaccgtcgcctacaaggagccgtccgcgccgggcccgtcgcgcatc
acgatcctgccgctcaatggcgcgcggatgcgccgcttcgacggcgtggtggtggtgggc
tgcgacgatgcccagttgccgtccagcgcggccgagctgatgttcttctcgaaccagatg
cgccgcgagctggggctggaagaccgcgaggcgcgcttcgcccagcaggcgcgcgacctg
gccgaagtgctgctcaacaatgacgatgtcgtgctgacgtggcagcgctacggcagccgg
ggcgagccgcaccacgtctcgggctggatcgagcggctgtcggcctgctgcgcgcgcgcc
ggcgcgccgatcgaggccaacgcgccccagccgccgctggaaaccgtcgcgcggccgtcg
ttcatgcccgcgccgtcggcgcccgcgcacgtgcccacgcgctggagcgcggcggcctac
aacatgctgcggcgctgcccgtaccagttctttgccggccgcatgctcggcctggccgga
ctcgaagtgctgaacgacgacctggaaaagcgcgacatcggcaacctgctgcaccgcgtg
ctgctgcaataccaccaggaaatccacgatgccggcgagcgcgacgacgcgcggcggctt
gcgcgcctgcgcgagatcacggacacggtcttcggcaagcagatggccgacgacggcaac
gccatcagctactaccgccgctggtgcgaggtgctgccgtcgtacgtcgcctggcaggcc
gcgcgcgaggaaatgggctggcactggcgcggcggcgagctcgacgccggcgtcgacgtg
gccatgcccgacggcgtgccgctgcggctggccggccgcatcgaccggctcgacaagggc
ccggacggcgctcacgctgtgctcgactacaagacccagcccgccagccgcctgcgccgc
aaggccggcgatgccgaggaagactgccagctcgcgttctacggcctgctgcgggccgat
gcggtggccggtagctgggtggcgctggaaggcgtgaagcagggcgggcgcgacagcgcc
ccgggcgcgcagcgcgaagtcgacctgccggagttccaggccgccgtgacgtggctggag
cgccagcttcggcacgatgtgggccgcctgcgccagggtgcgaagctgcccgcgttcggt
gacgccgcggcctgcacctattgcgaagcgcgcggcctgtgccgcaagggcttctgggaa
tccaccaccttgcccgacctgaagacatga
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