Cupriavidus pauculus: EHF44_12040
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Entry
EHF44_12040 CDS
T05738
Name
(GenBank) ATP-dependent exonuclease
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cpau
Cupriavidus pauculus
Brite
KEGG Orthology (KO) [BR:
cpau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpau03400
]
EHF44_12040
Enzymes [BR:
cpau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EHF44_12040
DNA repair and recombination proteins [BR:
cpau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
EHF44_12040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
PDDEXK_1
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AZG14104
UniProt:
A0A3G8H155
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All DBs
Position
1:2228272..2231892
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AA seq
1206 aa
AA seq
DB search
MSQSHDIHAYLRDGQPVGEADFTRAACDPARSVVVEACAGSGKTWLLVARLVRLLLAGAA
PHEILAITFTRKAAEEMRERLLEVLAQLASGPDDAVLAQLEMRGLDPQAARAALPRARVL
HAQVLASPGRMAIDTFHGWFGTLLRGAPLASGIVPGASLREDALRMKREAWAPFWRALAQ
PRHAELRQAYEQLVDAIGDFQTRSLLDRMFHARNEWWAFREAGDPASRLAADLGDDATTD
VLVDALADDDWLEACAQHAVTLGRAGKTEQTHATRLMDGLRAIRAWRDAGAAPGDAATQA
FHALRAAFFTDAGKPRAMKATSALVKVCGGEGAAEDLLACMAAHCARLDEIATRRCEAAV
LAINLALYRLGDALLDRYQRHKGEQRAMDFADLEWLAARLMADEETATYLQVRLDARYRH
LLLDEFQDTNPLQWRILQGWLAGYQGLGDKPTVFLVGDPKQSIYRFRRADARLFDAAREM
LQADFRATVLRTNRTRRNRPEVLHWVNAVFDHARAEGRYPLYETQTTALHDPGGPVWLLP
LVQADEAEEAAEATGGKDDDGGADDTGDGHRDTLTQPRVQQGDSLRFEEGRRVAAWLHYL
RDHVPVREGEGPKQVSRRATWRDMQLLVRRKTHLPDYERALREAGIPCLSPRRGGLLTTL
EALDLSALLAFLMTPESDLDLAHVLKSPIVGATDDDLLRLASMEGEGGWWARIGEQGLPP
DTSDALRGGIARLAAWLALAPHRPVHDLIDHIYHHGEVRRRYAEAAPSAIREQVLANLDA
FLKLSLDLDGGRYPSLPKFIDELQEIRRGDEDESPDEGGMGEGMEEAEAGPDDEVDSQLD
AVHILTVHAAKGLEAPFVVLLDANHSDPAADRGGILVDWPPASPAPRHFSAYGKRSERGL
ARAPMFEAEAALAERENWNLLYVAMTRAQQGLLVSGVMGRASKREESPGAEIAGSWYVRL
AAAGVGDAVTPYPEDVQAGASAHAADSERVRYTDFRLRYRDAAELQVADGTEAFEDDPES
TVFDAQAAAHGELVHALLERLTRYPDAYAGVPDAATVMRWFPLTGAGAPQAREQWQRQAE
AAVADLHAMLAAPALRPLLFAQDAVAARNEVELYDDRGRLLRIDRLVEFDDRVVIIDYKQ
RLLPQEHAAYGAQLRRYVAAVQPMFPGKRVEAGVATAAGEWIDVQALQAAPRPPTPIATT
QQGSLF
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atgagccagagccacgacatccacgcctacctgcgcgacggtcagcccgtcggcgaggcc
gatttcacgcgcgcggcctgcgatccggcccgctcggtggtggtggaagcctgcgcgggc
agcggcaagacctggctgctggtggcccggctggtgcgactgctgctggcaggcgccgcg
ccgcacgaaatcctggccatcacgttcacgcgcaaggccgccgaggaaatgcgcgagcgc
ctgctggaggtgctggcgcaactggccagcggccccgacgacgccgtgctggcccagctt
gagatgcgcgggctagacccgcaggccgcgcgcgccgcgctgccgcgggcgcgcgtgctg
cacgcgcaggtgctggcgtcgcccggccggatggccatcgacacgttccacggctggttc
ggcacgctgctgcgcggtgcgccgctggcgtcgggcatcgtccccggtgcgtcgctgcgc
gaggacgcgctgcgcatgaagcgcgaggcgtgggcgccgttctggcgcgcgctggcgcag
cccaggcatgccgagctgcgccaggcctacgagcaactggtcgatgcgattggcgatttc
cagacgcgcagcctgctggaccgcatgttccacgcgcgcaacgagtggtgggcgttccgc
gaggccggcgacccggccagccggctggccgccgacctgggcgacgacgccaccaccgac
gtgctggtcgacgcgctggccgacgacgactggctcgaagcctgcgcacagcacgcggtg
acgctgggtcgcgccggcaagaccgagcagacgcacgccacgcggctgatggacggcctg
cgcgccatccgcgcctggcgcgacgcgggagcggcgcccggcgatgccgccacgcaggcg
ttccacgcgctgcgcgccgcgttcttcaccgacgccggcaagccgcgcgcgatgaaggcc
acgtcggcactggtcaaggtctgcggcggcgaaggcgcggccgaagacctgctcgcctgc
atggccgcgcattgcgcccggctcgacgagatcgccacgcgccgctgcgaggccgcggtg
ctggccatcaacctggcgctgtaccggctgggcgacgcgctgctggaccgctaccagcgc
cacaagggcgagcagcgcgcgatggacttcgccgatctcgaatggctggccgcgcggctg
atggccgacgaggaaaccgccacctacctgcaggtgcggctcgacgcgcgctaccgccac
ctgctgctcgacgaattccaggacaccaacccgctgcaatggcgcatcctgcagggctgg
ctggccggctaccaggggctgggcgacaagccgaccgtgttcctggtgggcgatcccaag
cagtcgatctaccgcttccgccgcgccgacgcccgcctgttcgacgccgcgcgcgagatg
ctgcaggccgatttccgcgccaccgtgctgcggaccaaccgcacgcgccgcaaccggccc
gaggtgctgcactgggtcaacgccgtgttcgaccacgcgcgcgccgagggccgctatccg
ctgtacgagacgcagaccacggcgctgcacgacccgggcggcccggtctggctgctgccg
ctggtgcaggccgatgaggctgaggaggccgccgaggccaccgggggcaaggatgacgat
ggcggggcggacgacactggcgacggccatcgcgacacgctgacgcagccgcgcgttcag
cagggcgattcgctgcgcttcgaggaaggccggcgcgtggccgcgtggctgcactacctg
cgcgaccacgtgccggtgcgcgagggcgagggcccgaagcaggtatcgcgccgcgccacg
tggcgcgacatgcagctgctggtgcggcgcaagacccatctgcccgactacgagcgcgcg
ctgcgcgaggccggcatcccgtgcctgagcccgcgccggggcgggctgctgaccacgctg
gaggcgctggacctgtcggccctgctggcgttcctgatgacgcccgagtcagacctggac
ctggcccacgtgctcaagagcccgatcgtcggcgccaccgatgacgacctgctgcggctg
gcgtcgatggaaggcgagggcggctggtgggcgcgcatcggcgagcagggcttgccgccg
gacacgtccgacgcgctgcgcggcggcatcgcgcggctggcggcgtggctggcgctggcg
ccgcacaggcccgtgcacgacctgatcgaccatatctaccaccatggcgaggtgcgccgc
cgctacgcggaggccgcgccgtcggccatccgcgagcaggtgctggccaacctcgacgcg
tttctgaagctgtcgctcgaccttgatggcgggcgctatccgagcctgccgaagttcatc
gacgagttgcaggagatccggcgcggtgacgaggacgaaagccccgacgagggcggcatg
ggcgagggaatggaagaggccgaggctggcccggacgacgaggtcgacagccagctcgat
gccgtccatatcctgaccgtgcacgcggccaaggggctggaggcgccgttcgtcgtgctg
ctggacgccaaccacagcgacccggcggcggaccgaggcggcatcctggtcgactggccg
cccgcttcgcccgcgccccggcatttttccgcctacggcaagcgcagcgagcgcgggctg
gcgcgcgcgccgatgttcgaggccgaggcggcgctggccgaacgcgagaactggaacctg
ctctacgtcgccatgacgcgcgcgcagcaggggctgctggtcagtggggtgatggggcgc
gccagcaagcgcgaggagtcgcccggcgccgagatcgctggaagctggtatgtgcggctg
gccgcggccggcgtgggcgacgcggtcacgccgtatcccgaggacgtgcaggccggcgcc
agtgcccatgcggcggacagcgagcgcgtgcgctacaccgacttccggctgcgctaccgc
gatgcggccgaactgcaggtggccgatggcacggaggcgttcgaggacgaccccgaatca
acggtattcgacgcccaggccgccgcccacggcgaactggtgcacgcgctgctggaacgg
ctgacgcgctatccggacgcatacgccggcgtgccagacgccgccacggtgatgcgctgg
ttcccgctgacgggcgccggcgccccgcaggcccgcgaacagtggcagcggcaggcggaa
gcggccgtggcggacctgcacgcgatgctggcggcgcccgcgctgcgcccgctgctgttc
gcgcaggacgccgtggcggcgcgcaacgaggtcgagctttatgacgaccggggccggctg
ctgcggatcgaccggctggtggaattcgacgaccgcgtggtcatcatcgactacaagcag
cggctgctgccgcaggagcacgcggcctacggcgcccagttgcgccgctacgtggcagcc
gtgcagccgatgttcccgggcaagcgcgtggaggcaggcgtggccacggcggccggcgaa
tggatcgacgtgcaggcgctgcaggccgcgccccggccgccgacgccaattgccacgacg
cagcaagggtcgttgttctga
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