Chlorobium phaeobacteroides BS1: Cphamn1_0125
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Entry
Cphamn1_0125 CDS
T00709
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpb03032
]
Cphamn1_0125
03400 DNA repair and recombination proteins [BR:
cpb03400
]
Cphamn1_0125
Enzymes [BR:
cpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Cphamn1_0125
DNA replication proteins [BR:
cpb03032
]
Prokaryotic type
DNA Topoisomerases
Cphamn1_0125
DNA repair and recombination proteins [BR:
cpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Cphamn1_0125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACE03105
UniProt:
B3EK37
LinkDB
All DBs
Position
116456..118942
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AA seq
828 aa
AA seq
DB search
MQRDKILPISIEDEMRDSYLDYSMSVIVSRALPDVRDGLKPVHRRVLFGMHELGLQAGKG
YKKSARVVGEVLGKFHPHGDTAVYDSLVRMVQDFSLRYPLIDGQGNFGSVDGDSPAAMRY
TEVRMKNIAGEMLKDLEKETVGFSLNFDDSLEEPTVLPSAMPNMLVNGASGIAVGMATNI
PPQNLSEVVNGLIAMIENPEITIDEIMEHIIAPDFPTAGIIYGYEGVKQAYHTGRGKVVI
RARAVVEVTQKNGRESIIVTELPYQVNKVRLIEKIVELIHLKKIEGIADIRDESDRDGMR
LVIELKRDAVAKVVLNHLYKHTPMQDTFGVILLALVDGVPKVLNLKEMMEAYLKHRNEIV
LRRTTYELAAAEKKAHILEGLKICLDNLDEVISTIRESPNAGVAQEKLMEKFGLTELQSK
AVLEMRLQRLTGMERDKIEKDYNETLALIEELRFILANPEKRMQIIKDELLKVKQVYGDE
RRTEIRPQEGEFSIEDMIAQEDVVITITHETFIKRFPVSGYRRQARGGKGVTGAQARHED
FVEHMFVASTHNYILFFTNKGRCHWLKVYEIPEAGRAARGRSLANIMELQPGEKIKAYIN
VKTFDDPLFIIMATAKGSIKKTEIEAFSRPRRNGIAAITIEDGDELIDARLTDGEHDIIL
AKNTGYAVRFAEKDVRPMGRTAMGVKGISLDEGETCISMVTSKRPDTSLLAVTDNGFGKR
SKVEDYRLTRRGAKGVITLKAHEKVGHLVGLLDVNDSDDLIIITSNGIVNRQHVSNIRLT
GRNTSGVRIVRLMQGDTISATARVPKSVDEEENEALSGPEDQIELFDS
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcagcgcgacaagattttaccgatcagcatagaagatgaaatgagggactcctacctc
gattattccatgtcggttatcgtcagccgcgcgttgcccgatgttcgtgacggtcttaag
ccggttcaccgcagggtgctgttcggtatgcatgaacttggtcttcaggcaggaaaaggg
tataaaaaatcagctcgtgtggtcggtgaggttctgggtaagtttcatcctcatggagac
actgcggtttacgacagtcttgtgcgtatggttcaggatttttccctgcgctatccgctg
attgacggacagggtaactttggatcagttgacggggattctcctgccgccatgcgttat
accgaagtgcgcatgaagaacatagcgggcgaaatgctgaaggatctggaaaaggagact
gtgggcttctcgctgaacttcgatgattcgcttgaagaacctactgttcttccttcggct
atgcccaacatgcttgttaacggtgcatccggcattgctgtcggaatggcgacgaatatt
ccgccgcagaatctcagcgaggttgtgaacggattgatcgcgatgatcgaaaaccctgag
attactattgatgaaatcatggagcatattatcgctccggacttccctactgccggtatt
atctatggatatgagggcgtaaagcaggcctaccataccggtcggggcaaggttgttatc
cgtgctcgtgcggttgtcgaggtgacgcagaaaaacggtcgggagtcgatcatagtaacg
gagcttccctaccaggtcaacaaggtccgcctgatcgaaaagatcgtggagctgatccac
ctgaaaaaaatagaagggattgctgatatccgggatgaatctgatcgtgacggtatgcgg
cttgttatcgagctgaagcgtgacgctgttgccaaagtggtgctcaatcatctctacaag
cataccccgatgcaggatacattcggcgttattctgcttgctcttgttgacggtgtgccg
aaggtgctcaacttgaaggagatgatggaggcgtatctcaagcaccgcaatgagattgtt
ctccgcagaaccacctatgagctggcagctgccgagaaaaaggctcatattctcgaaggt
ctgaagatctgtctcgataacctcgatgaagtgatctcgaccattcgcgagtctcctaac
gccggcgtcgcacaggaaaagctgatggagaaattcggcttgaccgagctacagtccaag
gctgttctggaaatgcgccttcaaaggcttaccggaatggaacgtgacaaaatcgaaaag
gattataacgagacactggcgttgatcgaggagttgcgttttattctcgcaaaccctgaa
aagcggatgcagattatcaaggatgagctgctgaaagtaaagcaggtgtatggcgatgag
agacgtacagagatcaggccgcaggagggagagttttccatcgaggatatgatcgctcag
gaggatgtggttattacgatcactcatgaaacctttatcaagcgttttcctgtgtcgggc
taccgtcgtcaggcaaggggcggcaagggagtgacaggcgctcaggccagacatgaggac
tttgtcgagcatatgtttgtggcgtcaacgcacaattacatccttttcttcaccaacaag
gggagatgtcactggctgaaggtatacgagatacctgaagcgggcagggcggccagggga
aggtctcttgccaacattatggagcttcagccgggcgagaagatcaaggcatatatcaat
gtcaagactttcgacgaccctctctttattataatggcgacagcgaagggtagtatcaag
aaaactgaaattgaggctttttccaggcctcgccgaaacggtatagccgccataactata
gaagatggtgacgaacttatcgatgcccgcctgactgacggtgaacatgatattatcctg
gccaagaacacaggttatgcggtgcgttttgcggagaaagatgttcgtccgatgggaaga
actgcgatgggcgtaaaggggatcagccttgatgagggagaaacatgtatttccatggtt
acctcgaagcgtccggatacttccctgctcgcggtgactgataacgggttcggtaagcga
agcaaggtggaggattatcggttgacccgaaggggggcgaagggcgtcattaccctgaaa
gcgcatgagaaggtcggtcatcttgtcggactgctcgatgtcaatgatagtgacgatctg
attattatcacctcgaacggtattgtcaatcggcagcatgtttccaatatccgactcacc
ggtcgcaacacttcgggtgtcagaattgtccgcctgatgcagggcgatacgatttccgct
accgcgagagtgccgaaaagtgttgatgaagaagaaaatgaagccctatccggtcctgag
gatcagatagaactttttgattcctga
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integrated database retrieval system
