Chlorobium phaeobacteroides BS1: Cphamn1_0248
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Entry
Cphamn1_0248 CDS
T00709
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
cpb
Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpb03016
]
Cphamn1_0248
Transfer RNA biogenesis [BR:
cpb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
Cphamn1_0248
Prokaryotic type
Methyltransferases
Cphamn1_0248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Ras
RsgA_GTPase
Dynamin_N
GTP_EFTU
ABC_ATPase
Arf
ABC_tran
Gtr1_RagA
Roc
AAA_29
PGP_phosphatase
cobW
AAA_28
AIG1
AAA_25
MMR_HSR1_Xtn
AAA_15
AAA_21
Motif
Other DBs
NCBI-ProteinID:
ACE03217
UniProt:
B3EKZ0
LinkDB
All DBs
Position
239908..241329
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AA seq
473 aa
AA seq
DB search
MNEPVSLPLQGEPIAAVATPVGVGALAVVRMSGEGVFSIADRVFTKVRSPETSLADSPGY
TAHFGKLYDGDRMIDEVIVLVFRSPDSFTVEDMVEITCHGGPVVTKHVLKLLLDNGCRLA
EPGEFTRRAFLNGRIDLLQAEAIGEMIHARSESAYRTAVNQMSGGLSGRLGTLREQLLHS
CALLELELDFSEEDVEFQSREELSGQVENLQQEVDKLVQSYQHGRLLREGVATAIIGRPN
AGKSTLLNALLGEERAIVSHMPGTTRDYIEECFIYEKTMFRLTDTAGLREAAEEIEHEGI
RRSYEKIAEADLILYLLDIGASDYEEETSTVTELRQKHPDIQLLVVANKTDTTEDSAERS
EKVAEKTGCQVLGISALKEDGLDRLKAGMSSMVEGLDKLHDASVLVTSMRHYEALRNASD
ALRNARELIDAQSETELIAFELRSALDYVGEITGKVVNEEVLNVIFGQFCIGK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaccagtttcccttcctctccagggtgagccgattgccgctgttgctactccg
gtaggggtcggcgcgcttgctgtggtcaggatgagcggtgagggtgttttttctatcgcg
gaccgggtctttaccaaggttcgttcgccggaaacatctttggctgactctcctgggtat
accgcccatttcgggaagttgtatgacggcgacaggatgattgacgaggtgatcgtgctg
gtgttccggtcacctgattctttcacggtcgaggatatggtcgagatcacctgtcacggc
ggtcctgtggtgacaaagcatgtgctgaagcttctgctcgacaacggatgcaggctcgca
gagcctggcgagtttacccgacgcgcattcctgaacgggaggatcgacctcttgcaggct
gaagcgatcggtgaaatgattcatgcccgctcggaatcggcatatcggaccgcggtaaac
cagatgagcggagggctttccgggaggctcggcacattgcgtgaacagcttctgcattcc
tgcgcgctgcttgaactggaacttgatttcagtgaagaggatgtcgaattccagagcagg
gaggagttgagcgggcaggtagaaaatctgcaacaggaagtcgacaagctcgtgcagtcc
tatcagcacggcaggttgctgcgcgagggcgtggcgaccgccattatcgggaggcccaat
gcgggtaaatcaaccctgctcaacgccttgctcggcgaggaacgggccattgtcagccac
atgccgggcaccacgagggactatatcgaggagtgtttcatctatgaaaaaaccatgttc
cggcttaccgataccgccggactccgcgaggcggctgaagagatcgagcacgagggaatc
cggcgcagctacgagaaaatcgccgaagccgacctgatcctctatctgctggatatcgga
gcctccgattatgaggaggagaccagtactgttaccgagctgcgccaaaagcatcccgac
attcaactgctggtggttgcgaacaagaccgataccacagaagacagcgctgagcgctca
gaaaaagttgccgaaaaaaccggttgtcaggtgctcggtatttcagccctgaaagaggat
ggtctcgatcggttgaaggccgggatgagcagcatggtcgagggactggacaagctgcac
gacgcgagcgtgcttgtcaccagcatgcgccactacgaggccctgcgcaacgcctcggat
gcgctacgcaacgcccgggaactgattgacgcgcaatcggaaaccgaactcatagccttc
gaactccgctccgccctcgactacgtcggcgagattaccggtaaggttgttaacgaggag
gttcttaatgtcatcttcgggcagttctgtatcgggaagtga
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