KEGG   Chlorobium phaeobacteroides BS1: Cphamn1_0337
Entry
Cphamn1_0337      CDS       T00709                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cpb  Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:cpb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cpb02048]
    Cphamn1_0337
Enzymes [BR:cpb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Cphamn1_0337
Prokaryotic defense system [BR:cpb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Cphamn1_0337
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like Y1_Tnp DEAD
Other DBs
NCBI-ProteinID: ACE03306
UniProt: B3ELH7
LinkDB
Position
343420..347457
AA seq 1345 aa
MPTPSEHKTVQSRILAYAEEIGWAVVSREEAEKRRAGFPTRHYIQSGKQENGGQECPPSG
KESLSLFFDDLLDAKVREFNPCYAEAEGALLGQFRHLHADIYGNREFVEQLRNRGKFFDH
EEKRERDLILIDYDDPARNVYEVTEEWAFHNGHYGTREDVVFLINGIPVLVIECKNASKD
EAIALGIDQIRRYHRETPELFVPQQLFTATDAIGFSYGATWNTVRRNIFEWKILGGGHSC
PPLHSELESGHSCPPLHSELESGLSSPPLHSDTAIGLSNPPLHLKDAEENGGQECPPSFD
VEENGGLENPPSFLDPEREIGMTQHRLPHWQQGDVWVFVTWRLADSLPQSKLEEWKEERE
IWLSNHPEPWDEKTEEEYHERFSRQIDEWLDQGSGSCLLREPAYAQIVANALRHFDGERY
QLASFVVMPNHVHVLFCPSGTHSLAGILKSWKGFSAREINKRSGKTGSFWQEEYWDRLIR
SEKHFFRVAKYIRENPIKGGGLSSPPLHSDFERGLENPPLHSDVNVGLSNPPFYYECELL
FGKNGGQECPPSVPGRLESKVKTFCAIPQVLAFLKEYIVFAEKDEELNKYILRQHQTGAV
DASVNRALDPVRSRGLVWHTQGSGKTFTMIKAAERLFRAPEAEKPTILLMIDRNELEDQM
LKNLAALGLGNLEHASSIARLNKLLKYDYRGIIVTMIHKFRDMPGNINTRSNIYVLIDEA
HRTTGGDLGNYLMAGLPNATFIGFTGTPVDKTVYGRGTFKTFGCEDDKGYLHKYSIADSI
EDGTTLPLYYQLAPNDMLVPHETLDAEFLSLAEAEGVADIEELNKILDRAVNLKNFLKGR
ERIEKVAQFVAGHYLANVEPLGYKAFLVGVDREACAHYKQALDQFLPSDYSRVVYTGNNN
DSVLLKKFHLDQKQERQIRKSFGKIDQQPKILIVTEKLLTGFDAPLLYAMYLDKPMRDHT
LLQAIARVNRPYENEAQEMVKPHGFVLDFVGIFDKLEKALAFDSKEINAIVKDIKLLKML
FQNKMEAIGGRTFLSAIGVQTADIRNGHWISNEDSECNGGLESHEDKCNGGLESPPPFTF
NDRDVDNLIEHFRDPERRKAFFKEYKEIEMLYEIISPDAFLRPFIERYATLSAVYDVVRK
AYAKRIQVDRDFQRKTNLLVQEKVGSYGVGELQGVVKIDSNAIDIINAQAGGAPTRVINL
IKSIEKIADDQSDDLFLIAMAERAQAVQESFESRQVTTAEALEQLMQAVEVNEERKKEQA
AKGFDGLTFFVYRTLLDEKIEHAEEVSRQIKTAFVEFPNWQKSEAALRELRKKITFAIFA
QSDDLERVTGIVDYLFRLLERANRI
NT seq 4038 nt   +upstreamnt  +downstreamnt
atgcccacaccctccgaacataaaaccgtccaatcccgtatcctcgcttatgccgaggaa
atcggctgggccgttgtgtctcgtgaggaggccgaaaaaaggagggcgggttttccaacc
cgccattacattcaaagtggcaagcaagaaaatggcggacaggaatgtccgccctccggt
aaagaatctttatctctattcttcgacgatcttcttgacgcgaaggtgcgggagttcaat
ccttgctacgcggaggctgagggcgcgttgcttgggcagttccgccatcttcatgcggac
atctatggcaaccgggaatttgtggagcaattgcgcaaccggggcaagtttttcgaccat
gaggagaagcgcgagcgcgacctgattctgatcgattacgacgacccggcgaggaacgtg
tacgaagtcaccgaagagtgggcctttcacaacgggcactacggcacgcgggaagatgtc
gtctttctcatcaacggtatcccggtgctggtgatcgagtgcaagaacgccagcaaggac
gaggcgattgccctcgggatagaccagattcgtcggtaccaccgtgaaacccccgagctg
ttcgtgccgcagcagctttttaccgccaccgacgccatcggcttttcgtacggagccact
tggaacaccgtgcgccggaacatattcgagtggaagatactggggggcggacattcctgt
ccgccattacattcagaattggaaagcggacattcctgtccgccattacattcagaattg
gaaagcggactttccagtccgccattacattccgacacggcaatcggactttccaacccg
ccattacatttaaaagacgctgaagagaatggcggacaggaatgtccgccctcctttgac
gttgaagagaatggcgggttggaaaacccgccctcctttcttgacccggagagagagatt
ggcatgacacagcatcggttgcctcactggcagcagggtgatgtgtgggtattcgtgaca
tggcggctggcggattcactgccacagtcgaaactggaggagtggaaagaagagcgggag
atctggctttcgaatcatcccgagccatgggatgagaaaaccgaagaggagtatcatgaa
cgcttttcgcgtcagatcgacgaatggctcgatcagggcagtggttcgtgtctgttgagg
gaacctgcttatgctcagatcgtggcgaatgcgttgcggcattttgacggagaacgctat
cagctggcttcgttcgtggtgatgcctaatcatgtgcatgtgttgttctgtccgtccgga
acgcattcgctcgccgggattctgaaatcctggaagggcttcagcgcgcgtgagatcaac
aaacgatcgggaaagacgggatcgttctggcaggaagagtattgggaccgtttgattcga
agtgagaagcactttttcagagtagcaaagtacattcgtgagaatccaataaaggggggc
ggactttccagtccgccattacattctgattttgaaagaggattagaaaacccgccatta
cattctgatgtgaatgtaggactttccaacccgccattttattacgaatgcgaattgctg
ttcggaaaaaatggcggacaggaatgtccgccctccgttcccggtcgtctcgaatcgaag
gtaaaaaccttctgcgccatcccgcaggtgctcgccttcctgaaggagtacattgtcttt
gccgagaaggacgaggagctgaacaagtacattctgcgccagcaccagaccggtgcggtg
gatgcatccgtcaatcgggcacttgatcctgtccgttcccgtggtctcgtctggcatacg
caggggagcggcaagactttcacgatgatcaaggcggctgaacggctcttccgtgcgcca
gaggcggaaaagccgaccatccttttgatgatcgaccggaacgagctggaagaccagatg
ctcaaaaacctcgccgctctcggtctcggcaacctggagcacgcgagcagcattgcaagg
ctgaacaaactgctgaagtatgactaccggggcatcatcgtcacgatgatccacaaattc
cgggatatgccggggaatatcaatacccggtcaaacatctacgtcctgatcgacgaagcc
catcgcaccaccggcggcgatctcggcaactacctcatggccggtttgcccaacgccacc
tttatcggtttcaccggtacgccggtggacaagaccgtctacggcaggggcaccttcaag
accttcggctgcgaggatgacaaggggtatctgcacaagtattccatcgctgacagcatc
gaagacggcaccacgctgccgctctactaccagcttgcccccaatgacatgctcgtcccg
cacgagacactggacgcggagtttctctccctcgccgaagccgagggggtcgccgacatc
gaagagctgaacaaaattctcgaccgggccgtgaacctgaagaactttctcaaaggcagg
gagcggatcgagaaagtcgcgcagtttgttgccgggcattacctcgctaacgtcgaaccg
ctcggctacaaggctttccttgtcggggtagaccgggaggcctgcgcccactacaagcag
gccctcgaccagttccttccgtccgattattcccgggtggtctacaccggcaacaacaac
gactccgttctgctcaagaaatttcatctcgaccagaagcaggaacgtcagatccgcaaa
agcttcggcaagatcgaccagcagccaaaaatcctcatcgtcaccgagaaactccttacc
ggattcgatgcgcccctgctctacgccatgtatctcgacaagccgatgcgcgaccatacc
ctgttgcaggccatcgcaagggtaaaccgtccctacgagaacgaagcgcaggagatggtg
aagccccacggtttcgtccttgattttgtcggtatcttcgacaagctcgaaaaagccctc
gccttcgacagcaaggagattaacgccatcgtcaaggatatcaaacttctgaagatgctt
tttcagaacaagatggaggctataggggggcggacattcctgtccgccattggagtacaa
acggctgatatacgaaacgggcattggatttcgaatgaggattctgaatgtaatggcgga
ctggaaagtcatgaggataaatgtaatggcggactggaaagtccgcccccctttacgttc
aacgacagggatgtcgataatctgatagagcatttccgagatccggagcggcggaaagcg
tttttcaaggagtacaaagagatcgagatgctctacgagatcatctctccggacgccttt
ctccgaccgtttatcgagaggtatgcgacgctttccgccgtgtacgatgtggtccgcaag
gcctatgcgaagcgtatacaggttgatcgtgatttccagcggaagaccaacctgttagtt
caggaaaaggtcggcagttacggagttggagagttgcagggcgtggtgaaaatagattcg
aacgccatcgacatcattaacgctcaggccggaggtgctccaacgagggtgatcaatctt
atcaagagcattgaaaagatcgcagatgatcaaagtgacgatctgttcctgatcgccatg
gcagaacgggcgcaggctgtgcaggagagtttcgagagccgtcaggtgacgacggccgaa
gccctggaacagctgatgcaagcggtcgaagtgaacgaggagcgaaaaaaagagcaggcc
gcaaaggggttcgatggactgaccttctttgtctaccggaccttgcttgatgagaagatc
gaacatgccgaagaggtcagcaggcagatcaagacggcgtttgtggaatttcccaactgg
cagaagagcgaagctgcgctgcgtgagcttcgcaaaaagattacctttgcgatctttgct
caatcagacgatctcgagcgagtcacgggtatcgtggactacctgttccgcctgctggaa
agggctaaccggatctga

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