Chlorobium phaeobacteroides BS1: Cphamn1_0404
Help
Entry
Cphamn1_0404 CDS
T00709
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpb03016
]
Cphamn1_0404
Enzymes [BR:
cpb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Cphamn1_0404
Transfer RNA biogenesis [BR:
cpb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Cphamn1_0404
Prokaryotic type
Cphamn1_0404
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ACE03369
UniProt:
B3ELP0
LinkDB
All DBs
Position
429585..430307
Genome browser
AA seq
240 aa
AA seq
DB search
MIEAKKLSTVSPTGDFLLVDKPVEWTSFDVVAKIRNTYTGAGLRRKVGHCGTLDPKASGL
LILATGRKTKQIASLEVLDKTYEGVIKLGVMTESFDAELPEYGQCSVSHLTDREIHDAAA
GLEGRCMQKPPMYSAVWHQGKRLYEFARKGQDIKERKTREITVNSFEITAIDLPFVRFRT
NVSKGAYIRVLADDLGRNLAVGGYLSSLRRVAIGEYRIEDARSVIDTVERIKREANDLAE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgattgaagcgaaaaaactctcgacagtaagtccaaccggtgattttctcctggttgac
aagcctgttgaatggacatcttttgatgttgtggcgaaaattcgtaacacctataccggt
gcggggcttcgcaggaaagtcgggcattgcggtacacttgatccaaaggccagcggtctg
cttattctcgcgaccggcagaaaaacaaaacagatcgcgtcactcgaggttctggacaag
acctatgaaggggtgatcaagcttggagtgatgactgagagtttcgatgctgaattgcct
gaatatggacagtgcagcgtcagtcatcttacggacagagagatacatgacgcggctgcc
ggacttgaaggcaggtgtatgcaaaagcctcctatgtactcggctgtatggcatcaggga
aagcgattgtatgaatttgccaggaagggacaggatataaaggaacgaaaaacacgtgag
ataacagtaaacagttttgagattaccgctatagaccttccttttgttcgtttcagaacg
aatgtttccaaaggagcatatatacgggttcttgccgacgatttagggagaaatcttgct
gtcgggggatatctttcttcgttgagaagggttgcgatcggtgagtacagaattgaggat
gcaagaagtgttatcgataccgtcgaacgtatcaagcgtgaagcaaacgatttagcagag
tag
DBGET
integrated database retrieval system
