Chlorobium phaeobacteroides BS1: Cphamn1_0479
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Entry
Cphamn1_0479 CDS
T00709
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb03030
DNA replication
cpb03430
Mismatch repair
cpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cphamn1_0479
03430 Mismatch repair
Cphamn1_0479
03440 Homologous recombination
Cphamn1_0479
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpb03032
]
Cphamn1_0479
03400 DNA repair and recombination proteins [BR:
cpb03400
]
Cphamn1_0479
Enzymes [BR:
cpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cphamn1_0479
DNA replication proteins [BR:
cpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cphamn1_0479
DNA repair and recombination proteins [BR:
cpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cphamn1_0479
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ACE03443
UniProt:
B3EM65
LinkDB
All DBs
Position
503502..503981
Genome browser
AA seq
159 aa
AA seq
DB search
MNSVPLLITNEMLKDKPCCEEVMLEFSGFIADHNIVAHNASFDRRFLDSELKRANRKYEG
SCCCSLLLSRRVYQDSPNHTLQTLVSHAGIPETGTFHRALADAEMTAYLWLSMIDRIRRQ
YGIPEISFDQLRELSRVDKLYAHRYLCALAEEPWNNVKT
NT seq
480 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagcgtcccccttctgattaccaacgagatgctgaaagacaagccctgttgcgaa
gaggtgatgcttgagttttcagggtttatcgccgatcataacatcgtcgcgcacaatgcg
tcattcgacaggcgttttctggattccgagctgaaacgggcgaaccggaaatatgaaggc
tcctgttgctgctctctgctcctttcaagaagggtgtatcaggattcgccgaatcatacg
ttacagacactggtgtctcatgcgggtatcccggagaccggaacgtttcaccgcgcgctg
gcagatgccgagatgaccgcgtatttgtggctgtcgatgattgatcgtattcgtcgtcaa
tacgggataccggagatttcctttgaccagttgcgtgaactctcaagagtcgacaagctc
tacgcccatcgatacctttgcgctctggcagaggaaccctggaataacgttaaaacgtga
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