Chlorobium phaeobacteroides BS1: Cphamn1_0794
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Entry
Cphamn1_0794 CDS
T00709
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb03420
Nucleotide excision repair
cpb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cphamn1_0794
03430 Mismatch repair
Cphamn1_0794
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpb03400
]
Cphamn1_0794
Enzymes [BR:
cpb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cphamn1_0794
DNA repair and recombination proteins [BR:
cpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cphamn1_0794
MMR (mismatch excision repair)
Other MMR factors
Cphamn1_0794
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
PcrA_UvrD_tudor
AAA_30
AAA_11
DEAD
AAA_12
DUF5604
Motif
Other DBs
NCBI-ProteinID:
ACE03745
UniProt:
B3ENW8
LinkDB
All DBs
Position
849177..851384
Genome browser
AA seq
735 aa
AA seq
DB search
MIDILEQLNDVQQQAVQKTDGPVMVLAGAGSGKTRVITYRLAYLIGQKQVAPHQILALTF
TNKAANEMRQRIDELLHPGSSRGLWIGTFHSIFARLLRNYIHLIGYDGNFSIYDSDDSKS
LIRQVMKELHIPVESVPVNTVQGIISRAKNNFILPAQFHAGASDYNGQKAAGIYEVYARR
LRENNALDFDDLLIKPLELFQEQPAVLEQLQDYFRYIMIDEYQDTNRAQYLVAKSLAAVH
RNIFVVGDDAQSIYSWRGADITNILNFQDDYPDVSAFKLVENYRSTQTILQAANGIIKRN
SRQIEKELVSHQSTGEPLTLLESFNEKREAEKVGENIQSLKLVKGYDYRDFAVFYRTNAQ
SRVLEDIFRIQRIPYRIFGSVSFYKRKEIKDAVAYLRFIRNDQDTESLLRIINFPPRKIG
EVSIGKLRDYAASQGISVYEAILKAEEAGFPARLKNALQGFSVVIEQLKHIAVDGSVYDV
LSSLYESTGITSLLKDENTPESMARHENLQELLSMARDFSDHNPEANSLDEFLNGISLAT
DYNEVQESDNYVSLMTVHAAKGLEFPVVFITGLEERLFPLNYYETDELEEERRLFYVAVT
RAQQKVFLSWSKSRYNYGQPQTCLRSMFIDEIDSSILVTEGGGEHEPGSGRSAGREGFSN
SRPAVPDFVSGRRERENRPKEASGLQSGMRVHHAMFGPGIVLAVQGSGEGQKARIKFRNA
GEKTLMVQYANLTVV
NT seq
2208 nt
NT seq
+upstream
nt +downstream
nt
ttgattgatattttagagcagttgaacgatgtgcagcagcaggctgttcagaaaacagac
ggtcccgtcatggttcttgcgggagcgggttcagggaaaaccagagtcatcacctacaga
ttagcctacctgatcggtcagaagcaggttgcgccccatcagatacttgcgctgaccttt
accaacaaggcggcaaacgagatgagacagaggatcgatgaacttctgcaccccggaagt
tcccggggactatggataggtaccttccattccatctttgcccgtctgcttcgcaactac
attcaccttatcggatacgacggtaatttttcgatctatgattccgatgacagcaaaagc
ctgatcaggcaggtgatgaaggagttgcacattccggtagagtcggtgcccgtaaacacc
gttcagggtattatcagccgggcgaaaaacaactttatacttcctgcccagtttcatgca
ggggcttccgattataacggacagaaggcggcaggaatttatgaggtgtatgcccgcaga
cttcgtgagaacaatgccctggattttgacgatctgctcataaagccgctggaacttttt
caggaacagccggctgttcttgaacagcttcaggactatttccgctacatcatgatcgat
gaataccaggacaccaaccgtgcccagtatcttgtcgcgaagtcactggccgccgttcac
cgtaatatttttgttgttggtgacgatgcgcagtccatctattcctggcgaggagccgat
atcaccaatattctgaattttcaggatgattacccggatgtctcagctttcaagcttgtg
gagaactatcgcagtacgcagacgatcctgcaggcggctaacggcataataaagagaaac
agcagacagattgaaaaagagcttgtttcccatcagagcacgggagagcccctgaccctg
cttgaatcgttcaatgagaagcgcgaggcggaaaaagtcggtgagaacattcagtccctg
aaactcgtcaaaggctatgattaccgggatttcgcggtgttttaccgaaccaacgcgcag
tcaagggtgttggaagatatttttcggatacagaggattccctacaggattttcggcagc
gtttcgttttataagcgaaaagagatcaaggatgccgtggcgtatctgaggtttatcaga
aacgatcaggatacagagtccctgctgcgcattatcaattttccgccaaggaaaatcgga
gaggtcagtatagggaaacttcgtgattatgccgcgtcacaaggtatatctgtttatgag
gcgatccttaaagccgaagaggccggttttcctgcaaggctgaaaaatgccctgcaggga
ttcagcgtcgtgatcgagcagttgaagcatatcgcggtggatggctcggtatatgatgtc
ctttcttctctctatgaaagtaccggtattacctcgctgcttaaggatgagaatactcct
gaatccatggctcgccatgaaaaccttcaggaattgctctctatggcaagggatttttca
gatcacaatccggaagctaactcacttgacgagtttctgaatggcatttctcttgcaacc
gattacaatgaagtgcaggaatcagataactatgtttctctcatgacggttcatgcggcc
aaaggtctggagtttccggtggtgtttattaccggtcttgaggagaggcttttccctctg
aattactacgagactgatgaacttgaagaggagagacggcttttctatgtcgccgtgaca
agagcccagcagaaggtttttctttcatggtcaaagagccggtataactacggtcagcct
cagacctgtctgaggtccatgtttatcgatgaaattgacagcagtattcttgttacggaa
ggggggggggaacatgaacccggaagcggcagatcggcaggcagggaaggtttcagtaac
agcaggcccgcagtgcccgattttgtttcaggtcgacgggagagggagaatcggccgaaa
gaggcttcaggcctgcaatcaggcatgagggtgcatcatgccatgttcggtccgggaatt
gttcttgctgttcagggtagcggtgaaggacagaaagcacggataaaattcagaaatgct
ggagagaagacattgatggtacagtatgcgaacctgactgtcgtatag
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