Chlorobium phaeobacteroides BS1: Cphamn1_0963
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Entry
Cphamn1_0963 CDS
T00709
Name
(GenBank) MiaB-like tRNA modifying enzyme YliG
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpb03009
]
Cphamn1_0963
Enzymes [BR:
cpb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
Cphamn1_0963
Ribosome biogenesis [BR:
cpb03009
]
Prokaryotic type
ribosomal protein modification factors
Cphamn1_0963
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
ACE03907
UniProt:
B3EPX5
LinkDB
All DBs
Position
complement(1037220..1038548)
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AA seq
442 aa
AA seq
DB search
MPENSPETMTRNRSIFLLSLGCSKNTVDSERLIGQARRKGLSFTNEPDEADIVIINTCGF
IADAKTESIDEILAAAEKRKNGEIEALYVMGCLSALYAAELRAELPEVDRFFGTADLPEI
LNILGTAYDPATRFERSLLSPSHYAWLKLSEGCSRTCSFCAIPKMRGRYKSESMEDLLQE
ATRLKAKGVKELNLIAQDITPYGLDLYGTSRLNDLMRELSDLNFDWIRLLYAYPLDFPLE
VIDTMRERENICDYLDMPVQHICDRILASMKRGIDKQGTIGLLESIRKRNPNIRLRTTMI
VGYPGETRAEFEELLQFVREFRFDRLGCFPYSHEEHTAAYDNLEDDIPEEEKQERVGELM
ELQEGISEKKNRALEEKALKVLVEEVEDNLAFARTEYDAPEVDNECVLDTAGIDIRPGDF
CMATIEESSAYELVGRIKNVIP
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgccggaaaacagtcctgaaaccatgaccagaaacagatcgatttttcttctgagcctc
ggctgttcaaaaaacaccgtcgattccgaacggctcatcggccaggcacggcgtaagggg
ctgagcttcaccaacgagccggacgaagccgatatcgtgatcatcaacacctgcggcttc
atcgccgacgccaagacggagtcgatagacgaaatcctcgccgcagctgaaaagagaaaa
aacggcgagatcgaggcactctacgtcatgggatgcctgagcgctctctacgcagccgag
ctcagggctgaactgcccgaagtcgaccgcttcttcggcaccgccgacctcccggaaatc
ctcaatattctcggaacagcatacgatccggcaacacggttcgaacgctcactactcagc
ccctcgcattacgcatggctgaaactctccgaagggtgcagccgcacctgctccttctgc
gcgatcccaaagatgcgcggacgctacaagagcgagagcatggaagacctgcttcaggaa
gcaaccaggctgaaagcgaaaggggtgaaagaactcaacctgatcgcacaggatatcacc
ccctatggcctggacctctacggaacgtcacgcctgaacgacctcatgagggaactgtcg
gatctcaacttcgactggatcaggctgctctacgcctaccccctcgacttccctctcgag
gtcatcgacacaatgcgtgaacgggaaaacatctgcgactacctcgacatgcctgtccag
cacatctgcgaccgcatcctcgcatcgatgaagcggggcatcgacaaacagggcaccatc
ggactgctggaatccatccggaaacgcaacccgaacattcgcctgcgcaccacgatgatc
gtcggctaccccggagaaacgagagcggagttcgaagaactcctgcaattcgtcagggag
ttccgtttcgaccgcctcggctgcttcccctacagccacgaagagcataccgccgcctac
gacaacctcgaggacgacatcccggaagaagaaaaacaggaacgcgtaggcgaactgatg
gagctgcaggaaggtatttccgaaaaaaagaaccgggcgctcgaagaaaaagcactgaag
gtgctcgtcgaggaggtagaagacaacctcgccttcgcccgcaccgaatacgacgccccc
gaagtggataacgagtgcgtcctcgatactgccgggattgatatcagaccgggtgatttc
tgtatggctacgattgaggagagctcggcgtatgaactggttggaaggattaaaaatgtt
ataccgtaa
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