Chlorobium phaeobacteroides BS1: Cphamn1_1004
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Entry
Cphamn1_1004 CDS
T00709
Name
(GenBank) D-alanine/D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb00470
D-Amino acid metabolism
cpb00550
Peptidoglycan biosynthesis
cpb01100
Metabolic pathways
cpb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Cphamn1_1004
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Cphamn1_1004
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Cphamn1_1004
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpb01011
]
Cphamn1_1004
Enzymes [BR:
cpb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Cphamn1_1004
Peptidoglycan biosynthesis and degradation proteins [BR:
cpb01011
]
Precursor biosynthesis
Amino acid ligase
Cphamn1_1004
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp
CPSase_L_D2
ATP-grasp_4
ATP-grasp_3
ATPgrasp_ST
Motif
Other DBs
NCBI-ProteinID:
ACE03946
UniProt:
B3EQ14
LinkDB
All DBs
Position
complement(1078209..1079291)
Genome browser
AA seq
360 aa
AA seq
DB search
MPNVTVALLFGGKSSEHEISIISAKAVSAHIDRTTYTLFPLYISRDGRWFKGRTARKVLD
LDITGLLKSRTIETTNRQLLAMTENRDEDLFDFNFQKEGIEVAFPVLHGAYGEDGKIQGL
LEVFAIPYTGCNVQSSSMTMDKEITKLCAVQAGIHVADYMTVLRPDYLNNRSAIAETIKK
RFAPPFFVKPANLGSSVGIAKIHSFDELENALDEACRLDVKILVEKAIEGREVEVAVLGN
EHPIASVPGEIEPGGDFYDFTDKYIDGSARLHIPARVDADTSARLQEEGIKAFRALGCSG
MSRIDFFVEKGSGRIILNEINSIPGFTSISMYPMLMEHAGIGFTELIDRLVRFALEKTPA
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacgttaccgtagccctgcttttcggaggtaaatcttcagaacatgaaatctca
attatttcagctaaagctgtctccgcacatatagaccgtaccacctatacactctttccc
ctctacatctcccgggacggccgatggttcaaaggcagaaccgcccgaaaagttcttgat
ctcgatataacagggctgctcaaatcccggactatcgagacgacaaatcgccagttgctc
gccatgactgaaaatcgtgatgaggacctgttcgactttaattttcagaaagaaggaatc
gaggtggcgtttcccgtgctccatggtgcctatggggaagacggcaaaatacaaggcctt
cttgaagtattcgcaattccctacaccggctgcaacgtacaatcctcatccatgaccatg
gacaaggagataacgaaactctgtgccgtgcaggcaggtattcacgtagcggactatatg
acggtacttcgtccggattacctgaacaaccggtcagcaatagcagaaaccataaaaaaa
cggtttgcgccgccgttcttcgtaaagcccgcgaatcttggttcgtcggtaggtattgca
aaaattcactctttcgatgagcttgaaaatgcacttgatgaagcctgcagactcgacgtc
aagattcttgttgaaaaagcgatcgagggacgcgaagtagaggttgccgtactgggaaac
gaacatcccatagcctctgtacctggagagattgagccggggggggatttttatgatttt
acagataaatatatcgacggctccgccagactgcatatccccgcccgtgtcgatgccgac
acaagcgcacgcctgcaggaggaagggataaaggctttccgggccctcggctgcagcggc
atgtcccgtattgatttctttgtagaaaagggctccgggagaattattctcaacgaaatc
aactcgatccccggatttaccagtatcagtatgtatccaatgctgatggaacatgctgga
ataggttttacggaactcatcgatagattagtacggtttgctttggaaaaaactccggca
taa
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