Chlorobium phaeobacteroides BS1: Cphamn1_1014
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Entry
Cphamn1_1014 CDS
T00709
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb03030
DNA replication
cpb03430
Mismatch repair
cpb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cphamn1_1014
03430 Mismatch repair
Cphamn1_1014
03440 Homologous recombination
Cphamn1_1014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpb03032
]
Cphamn1_1014
03400 DNA repair and recombination proteins [BR:
cpb03400
]
Cphamn1_1014
Enzymes [BR:
cpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cphamn1_1014
DNA replication proteins [BR:
cpb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cphamn1_1014
DNA repair and recombination proteins [BR:
cpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cphamn1_1014
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
AAA_30
AAA_16
AAA_14
AAA_24
RuvB_N
ResIII
AAA_18
DUF7090
TsaE
AAA_33
TIP49
AAA_assoc_2
DUF6396
Motif
Other DBs
NCBI-ProteinID:
ACE03956
UniProt:
B3EQ24
LinkDB
All DBs
Position
1087670..1088866
Genome browser
AA seq
398 aa
AA seq
DB search
MSYQVIARKYRPKKFADITAQEHITRTIQNSLRLGRVGHGYIFSGLRGVGKTTAARVFAK
AVNCSRMIDDPVYLKEVTEPCGECESCRDFDEGTSLNISEFDAASNNSVDDIRQLRENVR
YGPQKGRFRVYIIDEVHMLSTAAFNAFLKTLEEPPAHAIFIFATTELHKIPATIASRCQR
FNFKRIPLEDIEKQLQGICEAEDLGVDSESLQLIGRKAQGSMRDAQSILDQVIAFAVEQD
DERSIRYEKVAELLNYIDDDHFFAVTDAVADRDPEKMLDVARFVIDNGYDEQDFLEKLLE
HMRNFLIVFNLRSTRLVERPEQVRARYERDTARFNPSLIMRMVDLLLQAQKELKFQFEYQ
FRFELVLLKLIEIGNSAGTSSAATSPGGASEKKPAVQH
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttatcgcccgaaaatacaggccaaaaaagttcgccgatataacggct
caggaacatattacccgtactatccagaactccctcaggctgggcagagtggggcacggt
tacatattttcaggtctccgcggagtgggaaagacaactgctgccagagtgtttgcaaaa
gcggtcaattgcagcagaatgattgatgatccggtatatctcaaggaggtgaccgagcct
tgcggagaatgtgaaagctgccgcgattttgatgaaggaaccagtctcaatatttcggag
ttcgacgcggcatccaacaacagtgtagatgatatcaggcagctcagggagaatgttcgt
tacgggccgcagaaaggccgtttcagggtatacattatcgatgaggtgcatatgctctcg
acggcggcgttcaacgctttcctgaaaacgctcgaagagccgccggcgcatgctatcttt
atcttcgcgacaacagagctgcacaagatccccgcgacaatcgcttcccgctgtcagcgg
tttaatttcaagcggattccgcttgaggatattgaaaagcagcttcaggggatatgtgaa
gctgaagatctcggtgtagacagcgagtccctgcagcttatcggacgcaaggcacagggg
tcgatgcgggacgctcagagtattctcgatcaggttatcgcatttgctgtcgagcaggat
gatgagcggtcgattcgctacgaaaaggttgcagaactgctcaactacatcgatgatgac
cattttttcgcggtcaccgatgcggtggctgatcgagaccctgagaaaatgctcgatgtc
gcaaggtttgttattgataatggttatgatgagcaggatttccttgaaaagcttctggag
catatgaggaattttcttattgtcttcaatctgcgttcaaccagactggttgagcggcct
gaacaggtgagggcgcgctatgagcgcgatactgcccgtttcaatccctccctcatcatg
cggatggtggacctgcttcttcaggctcagaaagaactcaagtttcagtttgagtatcag
ttccgttttgaacttgtcctgctcaaactcatcgaaatcggtaacagtgccggcacttca
tccgctgcgacgtccccgggaggggcgtctgaaaaaaagccggcagtgcagcactga
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