Chlorobium phaeobacteroides BS1: Cphamn1_1296
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Entry
Cphamn1_1296 CDS
T00709
Name
(GenBank) HhH-GPD family protein
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Cphamn1_1296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpb03400
]
Cphamn1_1296
Enzymes [BR:
cpb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Cphamn1_1296
DNA repair and recombination proteins [BR:
cpb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Cphamn1_1296
Prokaryotic type
Cphamn1_1296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
ACE04227
UniProt:
B3EJ27
LinkDB
All DBs
Position
1407603..1408271
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AA seq
222 aa
AA seq
DB search
MRCEREKIACLQEKVFAFYRDNKRRFPWRETVDRYAVLISEVMLQQTQADRVVGKYLAWM
ERFPDIPALAEASLKDVLASWSGLGYNARGQRLHRCAMTILKEHDGVVPPSQEKLIELPG
IGAYTSRSIPIFADNLDIATVDTNIRRIYIHELGLPENIRPGELLSLAEEMLPEGRSREW
HNALMDYGALYLTGRKTGIRPLTRQSSFKGSKRWYRGRIRVC
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
gtgcggtgtgagagggaaaagattgcgtgtttgcaggagaaggtttttgccttctatcgt
gacaacaaaaggcggtttccctggagggaaaccgtcgatcgttatgctgttcttataagt
gaggtgatgctgcagcagactcaggcggatcgggttgtcgggaagtatcttgcatggatg
gagcggtttcccgatatccctgctcttgcagaggcgtccctgaaagatgttctggcatca
tggagcggtcttggctataatgcaagggggcagcgtcttcatcgttgcgccatgactatc
ctcaaagagcacgacggggttgtgccgccatcgcaggaaaagctgattgaattgcccggc
ataggagcctacacctcccgttctataccgatctttgctgataatctcgatattgcgact
gtcgataccaatatcagaagaatttatatccacgaactcggattaccggaaaatattcga
ccgggcgagttgctttctctcgctgaagaaatgctgcctgagggcagaagccgtgagtgg
cataatgctcttatggactatggcgctctttatctgaccgggaggaaaacaggaatacgc
cctcttacccgacagtcttcattcaaaggttcaaagcggtggtacaggggaagaattagg
gtttgctga
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