KEGG   Chlorobium phaeobacteroides BS1: Cphamn1_1305
Entry
Cphamn1_1305      CDS       T00709                                 
Name
(GenBank) DNA polymerase III, epsilon subunit
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
cpb  Chlorobium phaeobacteroides BS1
Pathway
cpb03030  DNA replication
cpb03430  Mismatch repair
cpb03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Cphamn1_1305
   03430 Mismatch repair
    Cphamn1_1305
   03440 Homologous recombination
    Cphamn1_1305
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:cpb03032]
    Cphamn1_1305
   03400 DNA repair and recombination proteins [BR:cpb03400]
    Cphamn1_1305
Enzymes [BR:cpb01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Cphamn1_1305
DNA replication proteins [BR:cpb03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     Cphamn1_1305
DNA repair and recombination proteins [BR:cpb03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     Cphamn1_1305
SSDB
Motif
Pfam: RNase_T DEDDh_C Rv2179c-like RNase_H_2
Other DBs
NCBI-ProteinID: ACE04235
UniProt: B3EJ35
LinkDB
Position
1419002..1419700
AA seq 232 aa
MINFLAKKKAARRCRRGELPDTVCGYINAFSGHSDLQFPVGDVRYVVFDTETTGFDTSRD
LVISIGAVAINALHIDVQDSFEVLIRRDNVGEKDAVTTHGLLCKDLDEGGEEQESLDAFI
NYVSTGVLVAQHADFDVAMINRMLHRYYGFELFNHVIDTASLAKRLEKGPYFNLAHKSGE
YRLDMLLDRYNIRMHDRHTAAGDAFLTARLFQMLLAKAEHAGIRTLKELLLT
NT seq 699 nt   +upstreamnt  +downstreamnt
gtgattaactttctggcaaaaaaaaaagcggcacgccgatgccggaggggagagcttccg
gatactgtttgcggttatatcaatgctttttccgggcattctgatcttcagttccctgta
ggcgatgttcgatatgtggtcttcgatacggagacgacaggtttcgacacgagcagagat
cttgttatctcgataggagccgttgcgataaacgcgctgcatatcgacgtgcaagattct
tttgaggtgcttattcgtcgcgataacgttggggagaaagatgcggttacaacccatggg
cttttgtgcaaagaccttgatgagggcggtgaagaacaggaatcactcgatgcgttcatc
aactatgtcagcaccggtgtcctggtggcacagcatgcggatttcgatgttgccatgatc
aatcgtatgcttcaccgctactatggctttgagctgttcaatcatgttatcgatacggca
agtctcgcgaaaagactggaaaaaggcccctacttcaatctcgcgcacaaaagcggtgag
tacaggctcgatatgcttctggatcgttacaatattcgaatgcatgacagacatactgct
gccggtgacgcctttctcactgcccggctgtttcagatgctgctcgctaaagcagagcac
gcaggaatcaggacgctcaaagagctgctgctgacataa

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