Chlorobium phaeobacteroides BS1: Cphamn1_1398
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Entry
Cphamn1_1398 CDS
T00709
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb00061
Fatty acid biosynthesis
cpb00071
Fatty acid degradation
cpb01100
Metabolic pathways
cpb01212
Fatty acid metabolism
cpb02024
Quorum sensing
cpb04146
Peroxisome
Module
cpb_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Cphamn1_1398
00071 Fatty acid degradation
Cphamn1_1398
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Cphamn1_1398
09145 Cellular community - prokaryotes
02024 Quorum sensing
Cphamn1_1398
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
cpb01004
]
Cphamn1_1398
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cpb04147
]
Cphamn1_1398
Enzymes [BR:
cpb01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Cphamn1_1398
Lipid biosynthesis proteins [BR:
cpb01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Cphamn1_1398
Exosome [BR:
cpb04147
]
Exosomal proteins
Exosomal proteins of breast milk
Cphamn1_1398
Exosomal proteins of breast cancer cells
Cphamn1_1398
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
SWC7
Motif
Other DBs
NCBI-ProteinID:
ACE04326
UniProt:
B3EJC6
LinkDB
All DBs
Position
complement(1513158..1514852)
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AA seq
564 aa
AA seq
DB search
MSSAPWIEHYDKGVPASLSPYPHHTIVDIVRDRAADYPDRTAFFFKGSSMSWSELDRLSN
ALSAALVSEGLKKTDRVALLMPNSPQMILSELAIWKAGAVAVPMNPLYTGHELEHAMKEC
GAETAIVLTPFYRKIRSLQASIGLRKIIATNIKEYLSPLKKVLFSLLKEKKDGHAIVLEP
GDLWLGEMIAGHRDAPCPERGVTPEDMALFLFTGGTTGLPKCAVCTHKALVVSGMQIARW
FSVVLDRGEDIIMLNMPLFHVYAQVGILGAAIVDDYPFALVPNPRDLDDLLVTIKKLKPA
VLPGVPTLFSGLINHPRTRKDSTVLGSLKLCVSGAAPLLLETKKRFEELTGGRIIDAYAL
TESMIGSVLTPVLGTYKEGSVGIPAPDVEIRIVDQESASRELPFHEVGEVIMRAPQLMKE
YWKRPEETMSTIRDGWLYTGDLGYLDDDGYLFIIDRKKDVIKPGGFQVWPRDVEEVIASH
PDVVEVGVAGVPDDYQGEAVKAWVVLREECVLDAETLREFCKKELVAYKVPKYISFTESL
PKTLVGKVLRRKLVEEHCQAAANG
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgtcctctgcaccatggatcgagcattatgacaagggagttcctgcttctctgtcgcct
tatccacatcataccatagtcgatattgtccgagaccgggcggctgattatcccgacagg
acagcgttttttttcaagggatcttccatgtcatggtccgagctggacaggctgagcaat
gcgctctcggccgcgctggtttcagaagggctgaagaagacagaccgtgtggcgctgttg
atgccgaattctcctcagatgatactcagtgaactggctatctggaaggcgggagctgta
gcggtaccgatgaaccctctctataccggtcatgagctggagcatgcaatgaaggagtgc
ggggcggagacagctatagttcttaccccgttttaccggaagatcagatcgttgcaggct
tctattggtctgcgaaagatcatagcgaccaatatcaaggaatatctctcgccgttaaaa
aaagtgcttttttctcttctgaaggagaagaaagatggccatgccatagtgcttgaaccg
ggtgatctctggcttggagagatgattgccggacatcgtgacgcaccttgtcctgaaaga
ggcgtaacgccggaagacatggctttatttctgttcaccggcggtactaccggactgccc
aaatgcgcggtatgtacccataaggctctggtggtcagcgggatgcagatcgcacggtgg
ttcagtgtcgtgcttgaccggggggaggatatcataatgctcaatatgcccctgtttcat
gtttatgctcaggtggggatacttggagcagctattgtcgatgattatcctttcgcgctt
gttccgaaccctcgtgatctcgatgatctgctggttaccatcaaaaagcttaaaccggca
gttcttccgggtgttccgacactcttttcaggtttgatcaatcatccaaggacacgcaaa
gacagcactgttctgggttcactgaagctctgtgtttccggagcggcccctttgctgctt
gaaaccaagaagcggtttgaggagctgacaggaggcagaatcatagatgcatacgctctt
accgagtcgatgatcggttccgttcttacccccgtgctgggaacctacaaagagggctcc
gtgggcatacctgctccggatgtggagattcgtatagtcgatcaggagagtgcgtcccgt
gaattgccgtttcatgaagtcggtgaagtgataatgcgcgctccccagctcatgaaagag
tactggaagcgccccgaagaaaccatgtcgactattcgtgatggctggttgtacaccggt
gaccttggttacctcgatgatgacggctatctgttcatcatcgacagaaaaaaggatgtc
atcaagcctggcggttttcaggtttggccgcgggatgttgaagaggttatcgcgtcacat
ccggacgtagtagaagtcggcgttgcgggagttccggacgactatcagggagaagccgtc
aaagcctgggtcgtgctgcgtgaggagtgtgtgctcgatgccgaaacgttgcgtgagttc
tgtaaaaaggaactggtggcctataaggtgccgaagtatatttcttttacggagtccctg
ccgaaaaccctggtaggaaaggtgctgcgccgcaagcttgtcgaagagcattgccaggct
gctgcgaacgggtga
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