Chlorobium phaeobacteroides BS1: Cphamn1_2000
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Entry
Cphamn1_2000 CDS
T00709
Name
(GenBank) RNA binding S1 domain protein
KO
K02945
small subunit ribosomal protein S1
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
Cphamn1_2000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
cpb03011
]
Cphamn1_2000
Ribosome [BR:
cpb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
Cphamn1_2000
Bacteria
Cphamn1_2000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
PCB_OB
MRP-S35
PLD_C
Propeptide_C25
Peptidase_M30
Motif
Other DBs
NCBI-ProteinID:
ACE04911
UniProt:
B3EMH2
LinkDB
All DBs
Position
complement(2151684..2153459)
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AA seq
591 aa
AA seq
DB search
MSETQTIEQKKVVEKGPKNHHVKFFANYDSSELDQMELLYSSTLNEITEEEIVKGTIVAI
SNKDVTIDVGFKSEGIVSKLEFKDEEELQVGDEVEVYLENIEDKMGQLILSKRKADVLRI
WDKIYDSIENDTIINGKIINRVKGGMTVSLSGVEAFLPGSQIDVKPVRDFDALVGQTMDF
RVVKINPVTQNIVVSHKVILEEEYAAKREEMLANIKVGMILEGSVKNITDFGIFVDLGGL
DGLVHITDITWGRINHPSEVVDLDQPIKVVVVAFDENTKRVSLGMKQLESHPWENIEIKY
PVGIKTNGRVVSITDYGAFVEIEKGIEGLVHISEMSWTQHIKHPSQFVTLGQEVECVILN
VDKEHTKLSLSMKRVNEDPWIALSEKYIENSLHKGTVSNITDFGVFVELEPGVDGLVHIS
DLSWTKKIRHPSELVKKNQDLEVKVLKFDVNARRIALGHKQINQDPWDEFEQKYAVGAEC
AGKISQIIEKGVIVILPGDVDGFVPVSHLLQGGVKDINASFKVEDELPLRVIEFDKENKR
IILSALEYFKDKSKEEIEAYLQAHPNEKKEIEDATAELDSQSNTDDAKDGE
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaaacgcaaacaatcgaacaaaagaaggtagttgagaaagggcctaaaaaccat
catgtgaagtttttcgcaaactacgactcttcggaacttgaccagatggagctgctctat
tcgagcacgcttaacgagattaccgaagaggaaatcgttaaaggtactattgtcgccatt
tcgaacaaggatgttaccattgatgtcggatttaaatccgagggtatcgtttcgaagctt
gagttcaaggacgaagaagagctgcaagtcggtgacgaggtagaagtatacctcgaaaac
atcgaagacaaaatgggacagcttattctctcgaagagaaaagcggacgttctgaggatc
tgggacaaaatctatgattccatcgagaacgacaccattatcaacggaaagataattaac
cgtgtcaagggcggtatgacggtttcgctttccggagtcgaggcatttcttccgggttcg
cagatcgacgtcaaacctgtgcgcgacttcgatgcgctcgtaggacagacaatggacttc
agagtggtaaaaatcaatcctgtgacacagaatatcgttgtcagtcacaaggttattctc
gaagaagagtacgccgcgaagcgcgaagagatgcttgccaatatcaaggtgggtatgatt
ctcgagggttcagtaaagaatatcaccgatttcggtatttttgtcgaccttggcggtctc
gacgggcttgttcatattaccgatatcacctggggcaggatcaatcatccttcagaagtt
gtcgaccttgatcagccgatcaaagttgttgttgttgcttttgacgaaaataccaagagg
gtctctctcgggatgaagcagcttgaatctcatccttgggaaaatatcgagatcaagtac
cctgtaggcatcaaaacgaacggtcgagttgtttccattactgattacggcgcatttgtc
gagatagaaaaaggtattgaaggccttgttcacatctctgaaatgagctggactcagcac
atcaagcatccaagccagtttgttactctcggtcaggaagttgaatgtgttatcctcaat
gtcgataaagagcacaccaagctatcgctttccatgaagcgggtgaacgaagatccatgg
atcgctctttcagaaaaatatatcgagaattccctgcacaaaggtacagtcagcaacatt
accgatttcggtgtttttgtcgagcttgagcccggagtcgatggccttgtgcacatttca
gatctctcctggacgaagaagattcgccacccgagtgaactggtcaaaaagaatcaggac
cttgaggtaaaagtgttgaaatttgatgtcaacgcccgccgaatcgcgcttggtcacaag
cagatcaaccaggatccgtgggatgaattcgaacagaaatatgcggtcggggcggagtgt
gccggaaaaatatcgcagatcatagaaaaaggcgttatcgttatccttcctggtgacgtt
gacggttttgttccggtatcgcatcttcttcagggtggcgttaaggacattaacgcatcc
ttcaaggttgaagatgaactgccgcttcgtgttatcgagttcgataaggaaaacaaacgg
attattctctcggcgctcgaatatttcaaagataagagcaaagaggagattgaagcctac
cttcaggctcatccgaatgaaaagaaagagattgaggatgccactgccgagctggattca
caatcaaataccgatgacgctaaagacggcgagtaa
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