Chlorobium phaeobacteroides BS1: Cphamn1_2035
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Entry
Cphamn1_2035 CDS
T00709
Name
(GenBank) RNA polymerase, sigma 70 subunit, RpoD family
KO
K03086
RNA polymerase primary sigma factor
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Cphamn1_2035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpb03021
]
Cphamn1_2035
Transcription machinery [BR:
cpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Cphamn1_2035
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
DUF7238
Motif
Other DBs
NCBI-ProteinID:
ACE04945
UniProt:
B3EMK6
LinkDB
All DBs
Position
complement(2192340..2193239)
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AA seq
299 aa
AA seq
DB search
MRQLKISKQITNRESLSLDRYLQEIGKYELLTAEDEVKLTKAIKAGYDMPVDTTEYKRAK
RALDKLIKGNLRFVVSVAKQYQNQGLTLGDLINEGNLGLIKAAKRFDETRGFKFISYAVW
WIRQSILQALAEQSRIVRLPLNRVGTLNKISKAYSQLEQEYERDPNTKELANLLDMDSQD
VADTLKIAGRHVSVDAPFAQGDDNRLLDVLQNDGHKPDHGLTRDSLNLEVERSLSVLAPR
EADVIRSYFGIGMDNPLTLEEIGEKFKLTRERVRQIKEKAIKRLRQSAYSKVLKEYIGS
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaattgaaaataagtaaacagatcaccaatcgcgagagtctctctcttgatcgt
tacctgcaggagatcggtaaatatgagcttctgacggcggaagatgaggtgaagctcacc
aaggcgatcaaggcgggttacgatatgcctgttgataccaccgaatacaaacgggccaaa
cgggctctcgacaagcttatcaaaggaaatctgcgttttgtcgtctcagtcgccaaacaa
taccagaatcagggactgacgcttggtgacctgatcaacgaggggaatctcggcctgatc
aaagccgctaaacgttttgacgaaaccagagggttcaagtttatttcttatgccgtctgg
tggatcaggcagtctattctgcaggctcttgccgaacagtcaaggatcgtacgtcttccc
ctgaaccgtgtcggtacgctcaacaagatcagtaaagcctacagtcagcttgagcaggag
tatgaaagggatccgaataccaaggaactcgcgaatcttcttgatatggattctcaggat
gtcgccgatacgttgaaaatagctggtcgccacgtatccgtggacgctccctttgcccag
ggcgatgataaccgtttgcttgatgtactgcagaacgacggtcacaaacccgatcacggt
ctgacccgtgattcgctcaacctcgaagtcgagcgttctctttccgtgcttgctccccgt
gaagcggatgtgatccgctcctattttggtatcgggatggacaatccgctcactcttgag
gagatcggcgagaaattcaagcttacccgtgagcgggtgcgccagatcaaggaaaaagcc
attaaacgacttcgtcagtcagcgtacagtaaagttctcaaagagtatatcggcagttag
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