Chlorobium phaeobacteroides BS1: Cphamn1_2095
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Entry
Cphamn1_2095 CDS
T00709
Name
(GenBank) Peptidoglycan-binding domain 1 protein
KO
K21470
L,D-transpeptidase YcbB
Organism
cpb
Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpb01002
]
Cphamn1_2095
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cpb01011
]
Cphamn1_2095
Peptidases and inhibitors [BR:
cpb01002
]
Cysteine peptidases
Family C82
Cphamn1_2095
Peptidoglycan biosynthesis and degradation proteins [BR:
cpb01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
Cphamn1_2095
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Scaffold
YkuD
PG_binding_1
PG_binding_3
DUF7066
Motif
Other DBs
NCBI-ProteinID:
ACE05004
UniProt:
B3EN15
LinkDB
All DBs
Position
complement(2265648..2267348)
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AA seq
566 aa
AA seq
DB search
MFVMIALLVVLLAFGPGSTQTPPVQKRTVAASSVTEVKRKSGKNHEIRENIRCHIEQLEN
DQALRKGRERMAFNAYLADFYRSNDFSPVWVKRSQISEMLDAIKSVEADGLLSQDYHLSA
IQEFYENSPDTPFLKARYELLLTDAMFKLSYHLLHGKVDPEKLDSNWNLSEGVNGDGLAG
MLRNALAGDSLAALIAQLRPKHPSYSSLKEGLARYRRLAADGGWGTVPEGPTIKEIGQYD
ARIPALRGRLEISGEIEQLSKVDTSYADEAMRYSVGLQEAVKKFQNRHGLQEDGEVGPKT
LRALNVPVEKRVEQIRINLERYRWFVQKLEPTYLLVNIAGFNITYFEQGAFKWGSRVIVG
EPFWKTPVFKAQMQYVIFNPSWNVPPGILRKEALPAIRKDPGYLSRHGLQVVDRNGNVVN
PGSVNWASGAQSYRLRQPPGSRNALGRVKFMFPNKHLVYLHDTPGKHLFDKSSRAFSHGC
IRLQNPLDLAELLLGWSGEKVRQTVSAGRTRRINLPTKLPVFLLYLTAVAEGEEVQFKND
VYSRDAAVLQALNSPFPYKTVESCTF
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgtttgttatgatagctcttcttgtcgtgcttcttgcttttggtcccggaagtacacag
actcctcccgttcaaaagagaacagtagccgcgtcttctgttacggaggtaaagcggaaa
tccggaaaaaaccatgagatcagggagaacattcgctgccacattgagcagcttgaaaac
gatcaggctcttcggaagggacgggagcgcatggcgtttaacgcgtatctcgcagatttc
tacaggtcgaatgatttcagcccggtatgggtgaagcgatcccagatttctgaaatgctc
gatgcgatcaaatccgttgaagccgacgggctactgtctcaggactatcatctttcagca
attcaggagttttatgaaaattctccggacactccgtttttaaaagcccgctatgaactg
ctcctgacagatgccatgttcaagctctcctatcatcttctgcacgggaaagtggatccc
gagaagctcgattcaaactggaacctctcagagggcgtcaatggcgatggtcttgccggg
atgctccggaatgcgcttgccggagattcccttgcagcattgattgcacagcttcgcccg
aaacatccctcatacagcagcctgaaagaagggcttgccagataccgccgtcttgcagca
gacgggggatggggcactgttcctgaaggcccgacgatcaaggagatagggcagtatgat
gccagaatcccggcactgcgcggtcgtctggaaatatccggagagattgaacagctctca
aaggtagatacttcatatgcagatgaagcaatgcgatacagtgtcgggttgcaggaagct
gtcaaaaaatttcagaatcgtcatggtcttcaggaagacggggaggtcgggccgaaaaca
ctgcgggcactcaatgttcctgttgaaaagagggtggagcagatccgtatcaatcttgaa
cgttaccgatggtttgttcagaaactcgagcctacctacctcctggtcaatattgcgggt
ttcaacattacctattttgagcaaggcgcgttcaaatggggctcaagggtcattgtcggt
gagccgttctggaaaactcctgttttcaaggctcagatgcagtatgttatctttaatcct
tcatggaacgttccgccgggaattctccgaaaggaggcgcttccggccatccgcaaagac
cccggctatctctcccgtcacggcctgcaggtggttgaccggaacggaaacgtggtgaac
cccggttcggttaactgggcttccggggcgcaatcctatcgtcttcggcagcctccgggg
agcaggaacgctcttggtcgcgtcaagttcatgtttcccaacaagcatctggtgtatctt
catgatacaccgggcaagcatcttttcgataaaagttcgcgcgcattcagtcacggttgt
atcagactgcaaaaccctcttgatttagcagagttgctgctgggatggagcggggaaaag
gtgcggcaaaccgtgagtgcaggcaggaccagaaggattaacctgccaacgaagctccct
gtttttctcctgtatctcactgctgtagctgaaggggaggaagtacagttcaaaaacgac
gtgtacagtcgcgatgctgcggttctgcaggcgttgaacagtccgtttccctacaaaacg
gtggaaagctgtaccttctga
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