Chlorobium phaeobacteroides BS1: Cphamn1_2228
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Entry
Cphamn1_2228 CDS
T00709
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpb03016
]
Cphamn1_2228
Enzymes [BR:
cpb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
Cphamn1_2228
Transfer RNA biogenesis [BR:
cpb03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Cphamn1_2228
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
Motif
Other DBs
NCBI-ProteinID:
ACE05133
UniProt:
B3ENP4
LinkDB
All DBs
Position
complement(2413701..2415044)
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AA seq
447 aa
AA seq
DB search
MNSIIKGNVLQMTKKVYIRTFGCQMNQADTEIITALLQDEGYVMTGSEERADLVILNTCA
VRENAVEKILHTLDHMKGKRRSRPGLLVGVIGCVPQYYREKMFGMADGIDFLAGPDTYRQ
LPAMIANAGQGIRGADFGFSSDETYCGIEPARSGTISAFIPVMRGCNNRCAFCVVPFTRG
KERSRPFRSVLEDVGRLAASGYKEITLLGQNVNSYSDDEAACDFTELLDRVAVAAEGVRI
RFTTSHPKDISESLVRVIAARNNICNAIHLPVQSGSTRMLKLMNRGHTREEYFEKIAMIR
SAIPGVTVSTDLIAGFCGETLEDHQATLSMMEDVRFDFAYMFYYSVRPGTYAAKHLPDDV
PEEEKKRRLEEIIALQGSISGERNAAEVGAVVEVLAESESKRSSEMLMGRTDTNRVVVFD
RHGFEAGDLVKVRIRSSTPATLIGTPA
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgaatagtattatcaaagggaacgtacttcagatgacgaaaaaagtgtatatccgaacc
ttcggctgccagatgaatcaggccgatacggagataattacagcgttgctgcaggatgag
gggtatgttatgacgggatcggaagagcgtgccgatctggtgatactcaacacctgtgcc
gtgagggagaatgccgttgaaaagattctgcataccctggaccatatgaaaggaaaacga
cggtcgcgaccggggctgcttgttggcgtgatcggttgtgttccgcagtactacagggaa
aagatgttcgggatggcggacggtatcgattttctcgccggccctgatacctaccgtcag
cttcccgcgatgatagcaaatgccgggcaggggattcgaggagctgatttcggattttct
tctgatgaaacctattgcgggatcgaaccggcccgttcaggcacgatcagtgcgtttatt
cccgtgatgcggggctgcaacaacaggtgtgcgttctgcgtggtgccgtttaccagggga
aaggaacggagccgtccatttcgctctgtacttgaagacgtcgggcgccttgccgcgtcc
ggctacaaagagattactctgctcggacagaacgttaattcctatagtgatgatgaggct
gcgtgtgattttactgaactgcttgacagggtggctgttgcagcagaaggagtccgtatc
aggtttactacctcccaccccaaggatatttccgaatcactcgtgcgggtgattgcggcc
cgtaacaatatctgcaacgctattcacctccccgttcagtccggctcaaccagaatgctc
aaactgatgaaccgggggcatacaagggaggagtacttcgagaagatcgccatgatacgc
agtgctattcccggggtcacggtgtcgacagatctgatagcggggttctgcggtgaaacg
ctggaagatcatcaggccacgctgagcatgatggaggacgtacgatttgattttgcctat
atgttttactattcggtgcgacccggtacctatgcggcgaaacatcttcctgacgatgtg
cccgaagaggagaaaaaacgccgtctcgaagagataattgctctgcagggcagcatttca
ggggaacgcaatgccgctgaggttggcgctgttgtggaggtgcttgccgaatcggagagc
aagcggtcaagcgagatgctgatgggaagaacagataccaaccgggttgtcgtgttcgac
cgccatgggttcgaggcaggcgatctggtgaaggtgcgtatcaggtcgtcaactccggca
acgcttatcggcacacctgcatga
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