Chlorobium phaeobacteroides BS1: Cphamn1_2269
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Entry
Cphamn1_2269 CDS
T00709
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
cpb
Chlorobium phaeobacteroides BS1
Pathway
cpb03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cphamn1_2269
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpb03021
]
Cphamn1_2269
03400 DNA repair and recombination proteins [BR:
cpb03400
]
Cphamn1_2269
Enzymes [BR:
cpb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cphamn1_2269
Transcription machinery [BR:
cpb03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cphamn1_2269
DNA repair and recombination proteins [BR:
cpb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cphamn1_2269
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
HD_4
HHH_5
Motif
Other DBs
NCBI-ProteinID:
ACE05173
UniProt:
B3EP34
LinkDB
All DBs
Position
complement(2452311..2453297)
Genome browser
AA seq
328 aa
AA seq
DB search
MIYQMQMPEKIDVDEGTHNDKNGIFIAQPLERGYGVTLGNAMRRVLLASLPGTAITGIKI
DGVFHEFSAIDGVREDVPDIILNLKKVRFRSSTKRSCKTTVTVDGPADVTAGDIVAQEGE
FEVLNTDLHIATVNEGSRLSMDVYIGRGRGYVPAEDNRGDGMPLGFIAIDSIFTPIKNVK
FSVENTRVGQRTDYEKMILDVETDGSVSPDDSISLAGKIINEHVSLFANFSPTDEEFTEE
EYKQQDDEFENMRKMLLTRIEDLDLSVRSHNCLRLAEIDTLGDLVSRKEDELLTYKNFGK
KSLTELKEQLEKFELKFGMDITKYQMKG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgatataccaaatgcagatgcctgagaaaatcgatgtcgatgaaggtacacataatgat
aaaaacggaatatttatagcgcagccgcttgagcgtggctatggtgtgacattgggcaat
gcaatgcgcagagtgcttcttgcttctctgccgggtacggctattaccggaattaaaatt
gatggtgttttccatgagttctccgcaatagacggggtgcgtgaggatgtaccggatatt
attctgaaccttaaaaaagtacggttcagatcttcaaccaagaggagttgtaaaacgact
gtgacagtggacggtcctgcagatgtgaccgcaggagatattgtcgcacaggaaggcgaa
tttgaagtactgaacaccgatctgcatatagctacggtaaatgaagggtcgaggctgagc
atggatgtgtatatcgggcggggcagagggtatgttccggctgaggacaaccgcggtgac
gggatgcctttaggatttatcgcaatcgattcgatctttactcctattaaaaacgttaaa
ttctcagtcgagaatacacgtgtgggacagcgtaccgattacgagaaaatgatactcgat
gtagagacagacggttctgtatcacctgatgattcgatcagccttgcaggcaagatcatc
aacgagcatgtttcactgtttgcgaacttttcgccgacggatgaagagtttaccgaagag
gaatacaaacagcaggacgatgagtttgaaaacatgcgtaaaatgctcctgacacgaatt
gaagatctggatctttccgttcgttctcataactgcttgaggcttgctgaaatagataca
cttggtgatcttgtttcccgcaaagaagatgagcttctgacctacaagaattttggtaaa
aagtccttgactgagctgaaagagcagttggagaagtttgagttgaagtttggtatggat
attaccaaatatcagatgaaaggctaa
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integrated database retrieval system
