Chlorobium phaeobacteroides BS1: Cphamn1_2539
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Entry
Cphamn1_2539 CDS
T00709
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cpb
Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpb03400
]
Cphamn1_2539
DNA repair and recombination proteins [BR:
cpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cphamn1_2539
Archaeal homologous recombinant proteins
Cphamn1_2539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
ABC_tran
AAA_21
AAA_22
RsgA_GTPase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ACE05433
UniProt:
B3EQD5
LinkDB
All DBs
Position
complement(2708661..2711918)
Genome browser
AA seq
1085 aa
AA seq
DB search
MKILELRLKNLNSLYGEWIIDFTEPEYLSSGIFALTGPTGAGKSTVLDAICLALYGSTPR
LGKITRSGNEIMSRKTGECYAEVLFESQAGRFRCHWEQRRARKRAEGKLQDQEHWIADAD
TGKSVETKKSLVSVVIEEKTGMDFDRFTRSILLAQGGFDTFLKSDAEQKSKILEQITGTE
MYSAISRRVHERQRDEREQLDLLQAETSGIVILEPEQEKEIQDDLTARQKQETELAGKST
DTGKAITWLTTIEDLNKEILSLTDEAARLKGDTEAFKPERAKLEQATRAASLDGTYATLT
SHRKQQADDQASLKTDEAAFPELETSANTQAETLKTAEQLTLKAREELKTAAPLIRKIRS
LDQKIAEQTKAVSEGTDTCTREAAKIETDKQAGVKEQEKRTAAQKTLEAAVLYLKENARD
EWLISGLAGIEEQFGNLLAKQQEITQNETDLKKADTAVADAAKKLEDASRQCSLQKQEME
SATKNLQQGKDALSELLGDRLLREYRTEKETLLREMAFIRKIEELEDHRAKLEDGKPCPL
CGSTEHPFAEGNVPVPDVFEQKIESLTRLINKAEDQEAAIRTLEQAETTARKNLNDSEKL
ETNAITDRKAAEKTLAELKGVLTKLRTGFDELKLAVSGKLEPLGIKEIPESEVEALLESL
KSRLKEWQEQVQQKTEIEKQIAAIDSEVQRLDAVIDTQVKALTEKQENLERLKKELADGT
DERKQLYGDKKPDDEEGRLNKAIADAEEVEKKARILNTESQQKLTTAKTHVDSLKKRIEQ
RATELNKAETDFSVALIPAGFADEKSFLEARLSQEARESLSSRAKELDDAGTELKAKQKD
RETRLAKEVAKKLTDKTLEELEPQFKEFEESLKELRDAISCLKHKLSENFVAKERAEEKQ
VTIEARKRECRRWDKLHGLIGSADGKKYRNFAQGLTFELMVGHANRQLQKMNDRYLLLRD
DAQPLELNVIDTYQAGEIRSTRNLSGGESFIVSLSLALGLSKMASRNVRVDSLFLDEGFG
TLDEESLETALETLAGLQQDGKLIGVISHVYALKERIGTQITITPVSGGRSSLAGPGCRK
VVTIK
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttagagcttcgattgaaaaacctcaactccctttacggggaatggattata
gactttacggaaccggaatatctgtccagtggtatttttgccctgaccggaccgaccggt
gccggcaagtcgactgttctcgatgcaatctgcctcgccctctacggttcaacgccccgt
ctcggaaagatcaccagaagcggaaacgagatcatgtcccgcaagaccggcgaatgctac
gccgaggtattgtttgagtcccaggccggccgtttccgttgccattgggaacagcgccgt
gcccgaaagagggctgaaggaaaactgcaggatcaggaacattggatagcggatgccgac
acgggtaaatctgtcgaaacgaaaaaaagtctggtgtcagtggttatcgaagaaaaaaca
gggatggacttcgaccgctttacacggtccatcctgctggcgcaagggggcttcgatacc
tttctgaagtcagatgccgagcagaagtcgaagattctggagcagatcaccggcacagag
atgtattcggccatttcgagaagggttcatgagcgccagcgtgacgaacgggaacagctg
gacctgcttcaggctgaaacatccggcattgtgattctggagccggaacaggaaaaggaa
attcaggatgatcttacggcccggcagaaacaggagacggagcttgccggtaaatcaacc
gataccggcaaggccattacatggctgaccactattgaggacctgaacaaggagatcctc
agtcttacagatgaagccgccaggctgaagggcgataccgaggcgttcaaaccggaacgg
gccaaacttgaacaggccaccagggcagcatcactggacggaacctatgcaacgctcaca
tcccaccgtaaacagcaggctgacgatcaggcgtccttgaaaacggatgaagccgcattt
cctgaacttgaaacatctgcaaacacacaagctgagacgctcaagactgccgaacagctc
accctgaaagccagagaggagctgaaaacggcagccccgttgatccggaaaatccggtcg
cttgatcaaaaaattgccgaacagacaaaggctgtatcagaaggcactgatacctgtacc
agggaagccgcaaagattgagaccgacaagcaggcaggggtgaaggaacaggaaaaacga
accgctgcacagaaaacactggaagctgcagtgctgtacctcaaagagaatgcgcgggat
gaatggttgatcagcgggttggctggtattgaagaacagttcggcaacctgctcgccaaa
caacaggagatcacgcagaacgaaactgatctcaaaaaagccgatacggccgtagcagat
gccgcaaagaagctggaggatgcttccagacagtgttccctccaaaaacaggagatggag
tcagctactaaaaatcttcagcaaggcaaggatgccctgagcgaactgctgggagacaga
ctgctccgggaatatcgcaccgagaaggaaaccctgctgcgtgaaatggcttttatcagg
aaaatcgaggagcttgaagaccaccgggccaagctggaagacggcaaaccctgtccactc
tgtggctcgacagagcatccctttgcagagggcaatgttccggttcctgatgtatttgag
cagaagatagagtcgctgaccaggctgatcaacaaggcagaggatcaggaagccgccatc
agaacacttgaacaggcggaaaccactgcccgtaaaaacctgaatgacagcgagaagctg
gaaaccaatgccattactgacaggaaggctgctgaaaaaacgctcgctgaattgaagggt
gtcctcacgaaacttcggaccggctttgatgaactcaagctggcggtttccgggaaactt
gagccacttggcatcaaagaaataccggagtcagaggtcgaggcactgctcgaatccctc
aaatcaagactgaaggaatggcaggaacaggtacaacaaaagaccgaaatcgaaaaacag
attgccgccatcgacagcgaggtgcagcgtctggatgccgtgattgatacgcaggtcaag
gctttgactgaaaaacaggaaaatctggaacggctgaaaaaggagctggccgacgggaca
gatgagagaaagcaattgtatggcgataaaaagcctgatgatgaagaaggtcgactgaac
aaagcgattgctgatgccgaggaggtagagaagaaagccagaatcctgaacactgagtcg
cagcagaaactgacaacggcgaagactcatgttgactccctgaagaagcgcatagagcag
agagctactgaactgaataaagcggaaaccgacttttcggtggcgctgattccagcaggc
tttgcagatgagaagtcctttctcgaagccagactatcacaggaagctcgggagtcctta
tcctcacgggccaaggagctcgatgacgcgggaacggagctcaaagctaaacagaaagac
agggagacgcgcctggctaaagaggtcgccaaaaaactcacggacaagacacttgaggaa
ttggaaccgcagttcaaagaatttgaagaatccctgaaagagctgcgcgatgccatttcc
tgcctcaagcacaagctgagtgaaaatttcgtcgccaaagaacgggcagaggaaaaacag
gtgaccatagaagcccggaaaagggagtgccgtcgttgggataaactgcatggtttgatt
ggttcggcagacggtaaaaaataccgcaactttgctcagggactgacattcgagttgatg
gtaggacacgccaaccgtcagttgcaaaagatgaatgaccgttacttgctgcttcgtgat
gatgcgcagcctctggagctgaacgtcatcgatacttatcaggccggcgaaatcaggtct
accagaaatctgtccggtggtgaaagcttcattgtcagcctttcgctggcactggggctt
agcaagatggccagccggaacgttcgtgtggattcactgtttcttgacgaagggttcggc
accctggatgaagaatcgctggaaaccgcgctggaaaccctggccgggctccagcaggac
ggcaaactgataggagtcatttcccacgtatacgcgctgaaggaaaggatcggcacacag
ataaccataacacctgtttccggcggacgaagttcacttgcagggccgggatgcaggaag
gttgtcacgatcaagtga
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