Chlorobium phaeobacteroides BS1: Cphamn1_2541
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Entry
Cphamn1_2541 CDS
T00709
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cpb
Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:
cpb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpb03400
]
Cphamn1_2541
DNA repair and recombination proteins [BR:
cpb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cphamn1_2541
Archaeal homologous recombinant proteins
Cphamn1_2541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
ACE05435
UniProt:
B3EQD7
LinkDB
All DBs
Position
complement(2712365..2713861)
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AA seq
498 aa
AA seq
DB search
MLSSKGYENEEDFKALKKWYRDFIIRSIGLTTMKILHTSDWHLGRSLYGRKRYEEFSAFL
DWLVETIEDEGIDVLLVAGDVFDSSTPGNRAQELYYRFLCRVSNSCCRHIVVIAGNHDSP
SFLNAPKELLRALNVHVIGAVTDALEDEVFVIDDFGSEKSDSGQTSGQLEFFHSKISDQK
SAIICAVPYLRDKDVRTVEPGETIDDKNRKLVEGIREHYARVVEIAEQKRHALLRQPAVR
SQTSKIDTQKSKIQNHQSPIPIIAMGHLFTAGGKTVEGDGVRELYVGSLAHVGKEVFPPS
IDYVALGHLHVPQAVGGAEHIRYSGSPLPMGFGEANQQKSMVIVEFGLEKAVKLQKSPLK
NQKSKISLLPVPCFQPLVRITGSLEDIQARLEELKKDESRAWLEIEYTGREIIGNLRESI
EETLSDSSMEVRRIKNRMVMDRVIGSIEEEEALDDLDAQEVFTRCLDAFDVPHEDREELN
GAYNEVVRDVLEEDRDAE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
gtgctgtcgagtaaaggttatgaaaacgaggaggatttcaaggcgttaaagaaatggtat
agagatttcataatcagatcaattggtctcacaacaatgaaaatccttcacacatcagac
tggcatttaggccgctccctttacggcagaaaacggtatgaggagttttcggcgtttctg
gactggctggtggagactatcgaggatgaagggatcgacgtgcttcttgttgccggtgat
gtgttcgacagcagcacgccgggcaatcgggctcaggagttgtattatcgctttctttgc
cgggtgtccaactcctgctgtcgccatatcgttgtcattgccgggaaccatgattctccc
tcgtttctgaatgccccgaaagagctgctgcgggcgctcaatgtgcatgtgatcggtgcc
gtaacggacgccctggaagacgaggtttttgtgattgatgattttggatctgagaagtca
gattcagggcaaacatcggggcaattggagttttttcattcaaaaatcagcgatcaaaaa
tctgcaatcatctgcgctgttccctatctgcgcgacaaggacgtccggacggtggagccg
ggagagaccatcgacgacaagaaccgcaagctggtcgaaggcatcagggagcactatgcc
cgggtggtcgagatcgccgaacaaaagcgccacgcactcctccggcaaccggcagtccgc
agtcaaacttcaaaaatcgacactcaaaaatccaaaatccaaaatcaccaatcccccatt
cccatcattgccatggggcacctcttcaccgcagggggaaaaaccgttgaaggcgatggc
gtccgggagctgtatgtggggtcattggcgcacgtcggcaaggaggtattccctccgtcg
atcgactatgtcgccctcggccatctgcatgttcctcaggcggttggcggcgcggaacac
atccgatattccggctctccccttcccatgggcttcggtgaagcgaaccagcagaaatcc
atggtgatcgtagaatttggacttgagaaggcagtcaaacttcaaaaatcgccactcaaa
aatcaaaaatcaaaaatctccctccttcccgtcccctgttttcagccgttggtcaggatc
acgggttcgctggaagacattcaggcaaggctggaagagctgaaaaaggacgagagccgt
gcctggctggagatcgagtatacaggccgtgagatcatcggtaatcttcgggagagtatt
gaggaaacactctccgattcatccatggaagttcgtcggataaaaaacaggatggttatg
gaccgggtgatcggctcgatcgaagaagaagaggccctcgacgacctcgatgcgcaggaa
gtttttacccgctgcctcgacgcattcgacgtgcctcacgaagatcgggaggaactgaat
ggcgcgtataacgaggtggtgagagatgtgcttgaggaggatcgggatgcagaatag
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