KEGG   Chlorobium phaeobacteroides BS1: Cphamn1_2543
Entry
Cphamn1_2543      CDS       T00709                                 
Name
(GenBank) type I site-specific deoxyribonuclease, HsdR family
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
cpb  Chlorobium phaeobacteroides BS1
Brite
KEGG Orthology (KO) [BR:cpb00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:cpb02048]
    Cphamn1_2543
Enzymes [BR:cpb01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     Cphamn1_2543
Prokaryotic defense system [BR:cpb02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   Cphamn1_2543
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like T1RH-like_C HSDR_N_2 CSLinker
Other DBs
NCBI-ProteinID: ACE05437
UniProt: B3EQD9
LinkDB
Position
complement(2714988..2718200)
AA seq 1070 aa
MSDFQINEKHLSQIPALQLLIGLGYEYLTPGEALLERQQRMSNVLLENVLRNQLKAINRI
NFKGGVYLFSEENIQSAIQKLKNIKYDGLQKTNEAVYDLITLGTAMEQTIEGDSKSFTLN
YVDWRNPERNAFHVTVEYSVERSRSTETVRPDIVLFVNGIPFCVIECKSPQIEVDQAVSQ
SIRNQNDAYIPKLFVYTQLLLALNKNRAMYATTGTAVRFWSVWKEPGLTTDDETTKDTKS
TKLKELERLIQESLDYRVDPDDFSLSSVLSVAQNLRIVTEQDKSLYALCRPERLLELAWK
FTVFDGGLKKIARYQQYFVIKSTLNRVKQFAYSGSRKGGVIWHTQGSGKSLTMVMLTRNL
ALDPEISNPRIVLVTDRDDLDKQLGNTFAACGLEANRATSGRNLLELVAEKQSGIVTTLI
HKFDKAYAVNKYRDESSDIFVLVDESHRTQFGSFAARMRQMFPNACYLGFTGTPLLKKEK
NNFIRFGELVEPHYSISQAVEDGAVVPLLYEGRHVEMTQNRAAVDLWFERHTQGLSKEQQ
ADLKRKYARAEMLNKADQVIYMRAFDISEHFRANWQGTGFKAQLVAPGKVSALKYQEYLN
DIGMVGSEVVISPPDMREGFEETDDESNDEVVKFWQKMMKRYGSEEEYTKQLINQFKHGS
DPEILIVVDKLLTGFDSPRNAVLYLCRVLREHTLLQAIARVNRIHEGKEFGFIVDYANVL
GELDKALTMYSAFEGFDESDLVGTLTSINSEIEKLPDRHSDLWDLFKTVKHSYDEEAYEL
LLADDQLREEFYTRLAEFAKTLAIALSSEKFLTETEDKTLSRYKSDLRKFQSLKVAVKLR
YAESIDYRDYEPKIKKLLDTHIQADEVIQLNEPVNIFDEHMFNQVKEEQGVYQDKKTTGS
KADTIAHATKKAITEKMDEDPAFYQKFSLLIQQAIEDFRAKRISDLEYLQQVVDIRNKVV
GKVHDDVPDILSGNEDAMACYGVLKPFFEDHAPGLEPVVADTAIAIYDILEKHKKVHFWD
DEDAQKQAINEIEDYLYDELKTEKGIALSLDQMDEIIEKVMQVAKHRSYT
NT seq 3213 nt   +upstreamnt  +downstreamnt
atgagtgattttcagataaacgaaaaacatctgtcccagattcctgctttgcagctgctg
atcgggcttggctatgaatacctgactccgggcgaagcactccttgaacggcagcagagg
atgtccaatgtgctgctggaaaatgttctgcgaaatcaactgaaggcgattaaccgaatc
aacttcaagggtggcgtgtatctgttcagcgaggagaatattcagtcggccatccagaaa
ctcaagaatatcaagtacgacggtttgcagaaaaccaacgaggctgtctacgatctcatc
accctcgggacagccatggagcagactatcgagggtgactcgaagagttttactctgaat
tatgttgattggcgaaatcccgagaggaacgcatttcatgtgacggttgaatacagcgtc
gagcggtcccggagcacggaaacggtccggccggatatcgttctcttcgtaaatggcatt
cctttctgtgttatcgagtgtaagtccccgcagatcgaagtcgatcaggctgtttcccag
tcgatcaggaaccagaacgacgcctatatcccgaagctgtttgtctatacgcagttgcta
ctggcgctcaacaagaacagagccatgtacgcgacaacaggaacggctgtcaggttctgg
agcgtctggaaagagccggggttaaccacggatgatgaaaccacgaaagacacgaaaagc
acgaaactgaaagagctggagaggttgattcaggaatcgttggactatcgggttgaccct
gatgatttttctttgtcttccgtgctttccgtggctcaaaacctaagaatagttacggag
caggacaagtctctctatgctctttgccgcccggaaagacttttggaactggcatggaag
ttcacagtttttgacggaggattgaaaaagatcgcccggtatcagcagtacttcgtcatc
aagtccacgctgaaccgtgtcaaacagttcgcctacagcggttcccgcaagggcggggtg
atctggcatacgcaagggtcgggaaaatccctgaccatggttatgctgacgcgcaatctg
gccctcgatccggaaatatcgaatcctcgtatcgttctcgttactgacagggatgatctg
gacaagcagttgggaaatactttcgcggcctgcggcctcgaagccaatcgggcgacttcc
ggcaggaatctgctcgaactggtggcggaaaagcagtcaggaattgtcacgacgctcatt
cataaattcgacaaggcctatgccgtcaacaagtatcgggacgagtcttccgatatcttc
gtgctcgttgacgagagtcaccgtactcagttcggctcctttgccgcccgtatgcgccag
atgtttcccaatgcctgctatcttggtttcacgggtaccccgcttctgaaaaaagagaaa
aacaattttatcagattcggagaactggtagaacctcattactctatttcgcaggcggtg
gaagacggcgcggtcgttccgcttttatacgaggggcggcatgttgagatgacccagaac
agggcggctgtggatctgtggttcgagcgtcatacccaagggttgagcaaggagcagcag
gcggatctgaaacgcaaatatgctcgtgctgaaatgctgaacaaggcagatcaggtcatt
tacatgagggccttcgatatcagtgaacatttccgggccaattggcagggaaccggcttc
aaggcacagcttgttgcgcccggcaaggtttccgcgttgaaataccaggagtatttgaat
gatatcggcatggtcggttccgaggtcgtcatttcccctcctgatatgcgtgaaggtttc
gaggaaacggacgatgaatccaacgatgaggtggtgaagttctggcagaagatgatgaag
cggtatggaagcgaagaagagtacaccaagcaactcatcaatcagttcaaacacggcagc
gatcctgaaatcctgattgtcgtcgacaaactactgaccggttttgactccccccgaaat
gccgtactctatctatgccgtgttctcagggaacatactttattgcaggccattgcacgg
gtcaaccggattcatgaaggtaaggagttcggctttatcgtcgattatgcaaatgtactt
ggcgaacttgataaggccctaacgatgtatagcgcgtttgaagggttcgacgaatcggat
cttgtcggcacattgacctcgatcaacagcgagattgaaaaactgccagaccgtcattcg
gatttgtgggacctcttcaagaccgtcaaacattcatacgatgaagaggcgtatgagctt
ttgcttgccgatgaccaactcagggaagagttttatacccgtcttgccgaatttgccaaa
accctcgctatcgcgctctcatccgaaaagtttttaactgaaacggaggataaaacgctt
tccagatacaagtcggatctccggaagttccagtctctgaaggtcgccgtaaaactccgc
tatgctgaatctatcgattaccgcgattatgagccgaaaatcaaaaaattgctcgatacc
catattcaggcagacgaggttatccagcttaacgagccggtgaacatctttgatgagcat
atgttcaaccaggtcaaggaagagcagggtgtttatcaggataaaaaaacgacgggctca
aaagcagatacgattgctcatgcaacgaaaaaagcgatcacggaaaagatggatgaagat
cctgcgttttatcaaaagttctcgctgctcatccagcaggcaatcgaggattttcgggca
aaacggatatctgatctggagtatctgcagcaggttgtcgatatccggaacaaggttgtc
ggcaaggtacacgatgatgtcccggacatcctttcaggtaatgaggatgccatggcctgc
tatggtgtgctgaaacccttcttcgaagatcatgctccgggtcttgaacccgtcgttgca
gatacggcaattgccatctatgacattctggaaaaacacaagaaagttcatttctgggat
gatgaagatgcccagaaacaggcgatcaatgagattgaagattacctctatgacgagctg
aaaacggaaaaaggtattgcattgtctctcgatcagatggatgagatcattgaaaaggtc
atgcaggttgccaaacacaggagttacacatga

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