Chlorobaculum parvum: Cpar_0017
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Entry
Cpar_0017 CDS
T00725
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cpc
Chlorobaculum parvum
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpc03019
]
Cpar_0017
03009 Ribosome biogenesis [BR:
cpc03009
]
Cpar_0017
Messenger RNA biogenesis [BR:
cpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Cpar_0017
Ribosome biogenesis [BR:
cpc03009
]
Prokaryotic type
rRNA processing factors
Cpar_0017
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
CDC45
RRP4_S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
ACF10446
UniProt:
B3QQY1
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All DBs
Position
21280..22962
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AA seq
560 aa
AA seq
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MKKNVKKQLLMNKTGDEIQVALVEEGRLAELIIERPESMRSIGDIYLGRVHKVVEGLKAA
FVDIGQKSDGFLHFSDVGTTSEDYRALVEDDDDDENGGEDEEDEGEAEASSEASAPSREA
SRPGNQQKSDGRQESAADARERRQSYTQMIAQKLKPNDSILVQVIKEPIGTKGSRLTSDI
TIAGRFMVLLPFGGGQIAVSRRVVSRKERGRLKKLVRSMLPEGFGAIIRTVAEMQDETLL
KQDLEKLLVKWKQIEEKLQDAKPPQLIFKEDTIISSVLRDSLTTDVTEIVANSNSIYTET
LNYIQWAAPDMVKNVSLHEGKLPLFEGYGIAKDVESIFSRKVWLKSGGYIIIEHTEAMVV
VDVNSGRYAAKREQEENSLKTNLEAAREIVRQLRLRDIGGIIVVDFIDMIDAKNSKKVYD
AMKTELRNDRAKSNILPLSDFGIMQITRERIRPSLMQRMGDQCPACGGTGVVQARFTTIN
QVERWLRKFALQQKMPFQQLDLHVSPTVLEPMRESDMKTEMKWFLQHMVFVRIKSDESLR
SDDFRFYNRKTGADITSEYN
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaatgtgaaaaagcagctcctgatgaacaagaccggagatgagatccaggtc
gcgcttgtcgaggaggggcggcttgccgagttgatcatagagcgcccggagagcatgaga
agcatcggcgatatctaccttggccgggtgcacaaggtggtagaggggctcaaagcggcc
tttgttgatattggccagaagtctgacggattcctccacttctccgacgtcggaacgacc
agcgaggattaccgtgcgcttgtcgaggatgacgacgatgacgagaacggcggcgaggac
gaagaggatgaaggcgaagccgaagcctcatccgaagcatcggcgccgtcgcgagaggct
tcgagacccggtaatcagcagaagagtgatgggcgccaggagtctgctgccgatgcccgc
gagcgccgccaatcctacacccagatgattgcccagaagctcaagcccaacgattctatt
ctggtgcaggtcatcaaggagccgatcggtaccaagggctcgcgtctgacctctgacatc
accattgcaggccgcttcatggtgctgctgcctttcggcggcggccagatcgccgtgtcg
cgccgcgtggtttcgcgcaaggagcgtggtcgtctcaaaaagctcgtgcgctcgatgctg
cccgaagggttcggcgccatcatccgcacggtggccgaaatgcaggacgagacgctcttg
aagcaggatctcgaaaagctgctggtcaagtggaagcagatcgaggagaagctgcaggac
gccaagcctccgcagctcatcttcaaggaggacaccatcatttcgagcgtgctgcgcgat
tcgctcactactgacgtgaccgaaatcgtggccaactcgaactcgatctacaccgagacg
ctcaactacatccagtgggccgcgcccgatatggtcaagaacgtctcgcttcacgagggc
aagttgccgcttttcgaggggtacggcatcgccaaggatgtggagtcgatcttttcgcgc
aaggtgtggctcaagtccggcggctacatcatcatcgagcacaccgaggcgatggtggtg
gtcgacgtcaacagcggtcgctacgccgccaagcgcgagcaggaggagaactcgctcaag
accaacctcgaagcggcccgtgaaatcgtccgccagctcaggctgcgcgacatcggcggc
atcatcgtggtggacttcatcgacatgatcgacgcgaagaactccaagaaggtgtacgac
gctatgaagaccgagctgcgcaacgaccgcgccaagtcgaacatcctgccgctctcggac
ttcggcatcatgcagatcacccgcgagcgcatccgcccgagcctcatgcagcgcatgggc
gaccagtgccccgcgtgcggcggcaccggcgtggtgcaggcgcgcttcaccaccatcaac
caggtcgagcgctggctgcgcaaatttgcgcttcagcagaagatgcctttccagcagctc
gacctgcacgtcagcccgaccgtgctcgaaccgatgcgcgaaagtgatatgaaaaccgaa
atgaagtggttcctgcaacacatggtgttcgtcaggatcaagtctgacgaaagcctgcgc
agcgatgatttccgcttctacaatcgcaagactggggctgacatcacttccgagtacaat
tga
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