Chlorobaculum parvum: Cpar_0058
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Entry
Cpar_0058 CDS
T00725
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
cpc
Chlorobaculum parvum
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpc03000
]
Cpar_0058
Transcription factors [BR:
cpc03000
]
Prokaryotic type
Helix-turn-helix
Other families
Cpar_0058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
AAA_5
GAF_3
AAA
HTH_8
Mg_chelatase
AAA_2
AAA_3
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
ACF10486
UniProt:
B3QRB6
LinkDB
All DBs
Position
65447..67552
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AA seq
701 aa
AA seq
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MTTTHLPEALRLMQYIGDAIGTIRDPQELFRTVTDKLRLIFPFDSAVIITLDRDRRRVSV
FFEMLRFELPDHLRVQRRPITGTWLEAHLDDRGVTVASIAHDIPAFGEEDAPLLRTLHEL
GMRQIVLSPLRSGGRVIGFLSFVSAEEKLWSDGDKSLLSGVSSSIAIAVSNALAYDELRQ
REAETAMQLAINNALFTTKDRSQMLLTVCEQISRLVPCSFLGIRVVGSDGRFRIYDNFMR
GSGSSFAPFSPLEHLEMLPDDPVARESIEVISRPGIYSGERFEELCRDFRILELVRDRFG
ISSIIVVQLWDLPGSRAGLIISGVGVTLGDEEARTVSLIVPQLALALQNYLAFDEIDRLR
RKLEGERTYLVEEIRAAHNFEEIVGNSAPLAEVLRRVSLVAPTDATVLIEGETGTGKELI
ARAIHNLSPRKERVLVKVNCAALPASLIESELFGHEKGSFTGATERRIGKFELADGGTIF
LDEIGELPLELQAKLLRVLQEKELERIGGRSVIPVDVRVIAATNRDLEKEVATGRFRQDL
YFRLNAFPLSVPPLRERRDDIPVLAMYFARKFAREFGKPERAIREHDMNELVSREWRGNI
RELSHTIEQAVIVSEGDTLDLSSALPPRGEPGMEAQAEVMTMQEFEEQARNMERKLILDA
LDRAGGKVSGQGGAAELLRLNAKTLYSRIDKLGIRKRYGAG
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgacaaccacgcacttgcccgaggcgcttcggctcatgcagtatatcggcgacgccatc
ggcaccatccgtgacccgcaggagctgttccgcacggtcaccgacaagcttcgcctcatc
tttccgttcgattcggcggtgatcatcaccctcgaccgggaccgccgccgcgtgagtgtt
tttttcgagatgctgcgcttcgagttgcccgaccatctgcgggtgcagcggcgccccatt
accggcacctggcttgaggcgcatctcgacgaccgcggggtgaccgtcgcctccatcgct
cacgatattcctgcgtttggcgaggaggatgctccgctgctccggacgctgcacgagttg
ggaatgcggcagattgtgctttcgccgcttcgttccggtgggcgggtgatcggttttctc
agctttgtttctgcagaggagaagctgtggagcgatggcgataaatcgctgctttccggg
gtcagctcctccatcgccatcgcggtgagcaatgcgctggcctacgacgagctgcgccag
cgcgaggcggaaaccgccatgcagcttgcgatcaacaatgcactcttcaccaccaaggat
cgaagccagatgctgctgactgtctgcgagcagatcagccgcctcgtgccctgctcgttt
cttggcatccgcgtggttggttcggacgggcggttccgtatttacgataacttcatgcgc
gggtcgggcagcagtttcgcgcccttttcgccactcgaacatcttgaaatgttgcccgac
gaccccgttgcgcgggagagcattgaggtgatttcgcggcccggcatctattccggcgag
cgctttgaagagctgtgccgggattttcgcattctcgaactggtgcgcgatcgcttcggc
atcagctcgatcatcgtcgtgcagctttgggatttgcccggcagccgcgcggggctgatc
atttcaggcgtcggcgttacgctgggcgacgaggaggcgcgcacggtcagcctcattgtg
ccacagctcgcgctggcattgcagaactacctcgctttcgacgagatcgaccggctgcgc
cgcaagctcgaaggggagcgcacctacctcgtcgaggagatccgcgctgcacacaacttc
gaagagatcgtcggcaacagcgcaccgctggccgaggtgctgcggcgagtcagcctggtt
gctccgaccgatgccacggtgcttatcgagggcgaaaccggcaccggcaaggagctgatc
gcccgcgcgatccacaacctttcgccgcgcaaggagcgggtgctggtgaaggtcaactgc
gccgccctgcccgcatcgctgatcgagtccgagctgttcggccacgaaaaggggagcttc
accggcgcgactgaacggcgcatcggcaagttcgagctggccgacggcggcacgatcttc
ctcgacgaaataggcgagcttccgctggagcttcaggccaagctgctgcgggtgcttcag
gagaaggagctcgaacgcatcggcgggcggagcgtgattccggtcgatgtgcgggtcatc
gccgccaccaaccgcgaccttgaaaaggaggtcgccaccggtcgcttccgtcaggatctc
tacttccggctcaacgcctttcccctatcggtgccgccgcttcgcgaacgccgcgacgac
atccccgtgctcgccatgtactttgcccgcaaattcgctcgcgagttcggcaagccggaa
cgcgccatccgtgagcacgatatgaacgagctggtctcgcgagagtggcggggcaacatc
cgtgaactctcccacaccattgagcaggcggtgattgtctccgaaggtgacacgctcgac
ctctcctcagccctgcctccgaggggtgagcctggcatggaggcgcaggcggaggtcatg
acgatgcaggagttcgaggagcaggcgcggaacatggagcgcaagctcattctcgatgcc
ctcgaccgcgccggaggcaaggtcagcggtcagggtggcgcggccgagctgctcaggctc
aacgccaagacgctctattcccgcatcgacaagctgggaattcgcaagcggtacggggcg
gggtga
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