Chlorobaculum parvum: Cpar_0665
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Entry
Cpar_0665 CDS
T00725
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cpc
Chlorobaculum parvum
Pathway
cpc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Cpar_0665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpc03019
]
Cpar_0665
03400 DNA repair and recombination proteins [BR:
cpc03400
]
Cpar_0665
Enzymes [BR:
cpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cpar_0665
Messenger RNA biogenesis [BR:
cpc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Cpar_0665
DNA repair and recombination proteins [BR:
cpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cpar_0665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HHH
Motif
Other DBs
NCBI-ProteinID:
ACF11085
UniProt:
B3QMD2
LinkDB
All DBs
Position
712467..714296
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AA seq
609 aa
AA seq
DB search
MESHTPSLQTSPLNDALHRIFGFHSFRPNQEEIVRALMGGRDVFAVMPTGGGKSLCYQLP
AVLMPGTALVVSPLISLMKDQVDAARLNGIKAAFLNSSLDFTDQSAVLRSLQSGDLDLLY
VAPERFALDQFRELLAGCCISIAVIDEAHCISEWGHDFRPDYLSLSSLVELLPDVPVAAF
TATATQKVQRDIVSKLGLRDPFVLRASFDRPNLTYEVRFKEAGESQLVSLLNEFSGQSGI
IYRTSRKSVNDTAAMLQKRGIRALPYHAGLADRERHDNQEAFIRDEVDVIVATVAFGMGI
DKSNVRFVIHADLPKSIESYYQETGRAGRDGENSRCIMLFSHADIPKVRFFIDAMLDEDE
RRRALDALSKVVAFASSTVCRRRMLLEHFDEELPGDNCGSCDVCQGLHEVTDCTVEAQMV
LSTIVRTDSRFGATHLVDILLGSKNQKILEFGHDRLKVYGIGKGHDKKFWRRLIDDLMAR
KALGRSEGLYPVPYLLEGGVRILKGEEKVEMVRIKAKKGKSAAAKRGGLDALSEAEKQLF
EQLRTLRKKLADEQDIPPYMVFSDKTLVELSVVKPTTRDEMLAVSGIGEVKLERYAEPFL
EVIGEFTGG
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggaaagccatactccatccttacaaacgtctccacttaacgatgccttgcaccggatt
ttcggttttcactcgtttcgtccaaaccaggaagagattgtccgcgcgctgatgggtggg
cgggacgtgttcgccgtcatgccgactggcggtggcaagtcgctttgctaccagcttccc
gcagtgctgatgcccggcaccgcgctggtcgtcagcccgctgatctcactcatgaaagat
caggtcgatgcagcccgcttgaacggcattaaggcagcgttcctgaacagctcgctcgat
ttcacggatcagtccgccgtgctccgctcgctccagtccggtgatctcgacctgctctac
gtcgcgccggaacgcttcgcgctcgaccagttccgcgagctgctcgcgggttgctgcatc
agcatcgcggtgatcgacgaggcacactgcatctccgaatggggccacgattttcggccc
gactacctttcgctctcctcgctggtcgagctgctgcccgacgtaccggtcgcggccttc
acagccaccgccacgcagaaggtgcagcgtgacattgtcagcaagctcggactgcgcgat
ccgttcgtgctgcgcgcctcgttcgaccgcccgaacctcacctacgaagtgcgcttcaag
gaggcgggcgagagccagctcgtgtcgctcctgaatgagttttcaggccagtcgggcatc
atctaccgcaccagccgcaagagcgtcaacgacacggcggccatgttgcaaaagcgtggc
attcgcgccctgccgtaccacgcgggcctcgccgaccgcgagcggcacgacaaccaggag
gcgttcattcgcgacgaagttgacgtcatcgtggccacggtggccttcggcatgggcatc
gacaaatcgaatgtgcgctttgtcatccacgccgacctgccgaaaagcatcgagagttac
tatcaggagaccggacgcgctgggcgcgacggcgaaaattcccgctgcatcatgctcttt
tcgcacgccgacattccgaaagtgcgctttttcatcgacgcgatgctcgacgaagacgaa
cgtcgccgggcgctcgacgcgctctcgaaggtggtggcgttcgcctcctccacggtgtgc
cgccgccggatgctgctcgaacacttcgacgaagagctgccgggcgacaactgcggttcg
tgcgacgtctgtcagggcttgcacgaagtgaccgactgcacggtcgaagcgcagatggtg
ctctccaccatcgtccgcaccgactcgcgcttcggcgcgacgcacctggtcgatattctg
ctcggcagcaagaaccagaaaattctggagttcggccacgatcgcctcaaggtctatggc
atcggcaaaggccacgacaagaagttctggcgacgcctcatcgacgacctcatggctcgt
aaagccctcggtcgctccgaaggcctctacccggtaccctacctgctcgaaggcggagta
aggattctcaagggcgaggaaaaggtcgagatggtcaggatcaaggcgaaaaagggcaaa
tccgcagcagccaaacgcggcggcctcgacgcgctatcggaagccgaaaagcagctcttc
gaacaactccggacgcttcgcaaaaagctcgccgacgagcaggatattccaccgtacatg
gtgttttcggataagactctcgtcgaactgagtgttgtcaaacccacgacccgcgacgaa
atgctcgcagtatcggggattggcgaagtgaagctggagcggtatgcggagccttttttg
gaagtgattggggagtttacgggcgggtga
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