KEGG   Chlorobaculum parvum: Cpar_0761
Entry
Cpar_0761         CDS       T00725                                 
Name
(GenBank) helicase, RecD/TraA family
  KO
K03581  exodeoxyribonuclease V alpha subunit [EC:3.1.11.5]
Organism
cpc  Chlorobaculum parvum
Pathway
cpc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:cpc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    Cpar_0761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpc03400]
    Cpar_0761
Enzymes [BR:cpc01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.5  exodeoxyribonuclease V
     Cpar_0761
DNA repair and recombination proteins [BR:cpc03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecBC pathway proteins
     Cpar_0761
SSDB
Motif
Pfam: AAA_19 AAA_30 HHH_RecD2 SH3_13 OB_YrrC UvrD_C_2 HHH_5 Viral_helicase1 AAA_11 PhoH PIF1 NTPase_1 nSTAND3 Helicase_RecD AAA_22 AAA_29 AAA_16 T2SSE AAA_23 AAA_5 NPHP3_N AAA NACHT HHH ABC_tran RsgA_GTPase cobW AAA_28 AAA_7 DEAD MeaB SLFN-g3_helicase UvrD-helicase SRP54 Zeta_toxin AAA_18 AAA_14 AAA_15 ATP_bind_1 AAA_17 UvrD_C
Other DBs
NCBI-ProteinID: ACF11178
UniProt: B3QMM5
LinkDB
Position
complement(817993..820194)
AA seq 733 aa
MTTPADTHEERLSGSVERVTFHSEESGFTVLRLRVAGQREPVAVVGLAASPAVGEFMECV
GTWQNDRTHGLQFKATKITPVQPTTLEGKERYLASGQVKGLGNYYAKKLIEQFGDAVFDV
IENEPERLLEVPGIGRKRLDMVIESWTEQRAIRDIMLFLQEHGVGAARAWKIYRRYREGA
IATITENPYRLSLDIEGIGFQTADTIAASLGVERNSLMRAEAGITHVLGQMSSDGHCAVP
EETLIGEASRLLEIDRPLVAEAVTNEKLTRRIVGETIDEVPCIFLESLHRAETGVASALH
RLKRGPLPWEPLDPHDVLPWIEEQTGLELSPSQRSAVTLVLASKVSIITGGPGVGKTTIL
KAILSVLQREKVSVALCAPTGRAAKRLTESTGIEAKTIHRLLEFDPQIFDFKRGRGNPLD
VSFVVVDETSMVDVVLMQKLVAAIPDRAAVVFVGDVDQLPSVGPGAVLADLIASEVIPTV
CLTEIFRQAAESMIVVNAHRINQGEMPLTDEGEELSDFYIVPASSPEAIHDKVMQLVTER
IPKRFDLDPVRDVQVLTPMNKGGIGVQALNAELQARLNPTAEPKVTRFGSTFAPGDKVIQ
TVNNYDKEVFNGDIGLIEQIDTDAETLTALFDHHHVEYDFSDLDELSLAYAISIHKSQGS
EYPAVVIPLSMQHYPLLERNLAYTAVTRGRKLVVIVAEPKALDRAIRNCKSKRRLTGLVQ
RLKESGKQSWQNL
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgacaacacccgccgacacccatgaagagcgcctctcgggttccgtcgagcgggtaacg
tttcacagcgaggaatctggcttcacggtgctgcgcctgcgggttgccgggcagcgcgag
ccggtggcggtggtcggcctcgctgcctcgcctgccgtgggcgagttcatggagtgcgtt
ggcacgtggcagaacgaccgcacgcacggcttgcagttcaaggcgacgaaaataaccccc
gtacagcccaccacgctcgaaggcaaggagcgctacctcgcatcggggcaggtgaaggga
cttggcaactattacgcaaaaaagctgatcgagcagtttggcgacgcggtgttcgatgtg
atcgaaaacgaaccggagcgactactcgaagtgccaggcatcggacgcaagcggctcgac
atggtgatcgaatcgtggactgagcagagagccatacgggacatcatgctctttctgcag
gagcacggcgtcggcgcagcaagggcctggaaaatctaccgccgctaccgcgaaggggcc
atcgccaccatcacggaaaatccctaccgcctctcgctcgacatcgaaggcatcggcttc
cagacggccgacaccatcgctgcgagccttggcgtcgaacggaactcgctcatgcgggcc
gaagcgggcatcacccatgtgctcggccagatgtcgagcgacggccactgcgccgttccg
gaagagacgctcatcggcgaagcctcacgcctgctcgaaatcgaccgcccgctcgttgcc
gaagccgtgacgaacgaaaagctgacccgccgaatcgtaggtgaaacgatcgacgaagtg
ccgtgcatctttctcgaatcgctgcaccgcgccgaaacgggcgtcgcctcggcgctgcac
cgactgaagcgtggccccctgccgtgggagccgcttgatccgcacgatgtgctgccgtgg
atcgaggagcagaccggccttgagctctccccttcgcaacgcagcgcggtgacactcgtg
ctggccagcaaagtatcgatcatcaccggcgggccgggcgtcggcaagaccaccatcctc
aaggcgatcctctcggtgcttcagcgcgaaaaggtctccgtggcgctctgcgctccgacc
ggccgggcagccaagcggctcaccgaatcgaccggtatcgaggccaaaaccatccatcgc
ctgctcgaattcgatccgcagattttcgatttcaaacgaggacgcggcaatccgctcgac
gtttcgttcgtggtggttgacgaaacctcgatggtggacgtcgtgctgatgcagaagctc
gtggcggcgattcccgaccgcgcggcggtggtcttcgtcggcgacgtcgatcagttgcca
tcggttggccccggcgcggtgctcgccgacctgatcgcctcggaggtcatccccaccgtc
tgcctgaccgaaatcttccggcaagccgccgaatcgatgatcgtcgtcaacgcccaccgc
atcaaccagggcgaaatgccgctgaccgacgagggcgaggagctttccgatttctacatc
gttccggcaagttccccggaggcgattcacgacaaggtgatgcagctcgtcacggagcgc
atcccgaaacgcttcgatctagacccggtgcgtgacgtgcaggtgctgacaccgatgaac
aagggcggcatcggcgtacaggccctgaacgccgagctgcaggcgcgcctcaacccgacc
gccgagccgaaagtgacccgcttcggcagcaccttcgcgccgggtgacaaagtgattcag
acagtcaacaactacgacaaagaggtcttcaacggcgacattggcctgatcgaacagatc
gacaccgatgcggagacgctgacggcgctcttcgaccatcaccacgtcgagtacgacttc
agcgacctcgacgaactgtcgctcgcctatgccatcagcatccacaaaagccagggctca
gaatacccggcagtggtcattccgctctccatgcagcactaccccctgctcgaacgcaac
cttgcctatacggccgtcacgcggggacgcaagctcgtggtcatcgttgccgaaccgaag
gcgcttgaccgggcgatcaggaactgtaaatcgaaacgccgcctgaccggcctcgtgcaa
cggctcaaagagtccggaaaacaaagctggcaaaatttgtaa

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