Chlorobaculum parvum: Cpar_0867
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Entry
Cpar_0867 CDS
T00725
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpc
Chlorobaculum parvum
Pathway
cpc03030
DNA replication
cpc03430
Mismatch repair
cpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cpar_0867
03430 Mismatch repair
Cpar_0867
03440 Homologous recombination
Cpar_0867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpc03032
]
Cpar_0867
03400 DNA repair and recombination proteins [BR:
cpc03400
]
Cpar_0867
Enzymes [BR:
cpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cpar_0867
DNA replication proteins [BR:
cpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cpar_0867
DNA repair and recombination proteins [BR:
cpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cpar_0867
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ACF11280
UniProt:
B3QMX7
LinkDB
All DBs
Position
946960..950532
Genome browser
AA seq
1190 aa
AA seq
DB search
MQPVRKSALEFVHLHTHTHYSMQSSPIFPGELFAACKKQGMTTVAVTDYGAMFNMPELFG
QAAKAEVKLIMGSEIYLAGTDAHDTGRPATLILLIRNDIGYRNMCVILSRAARDGFSNGL
PHVDRSVLKECSEGLTCLSAAHSGQIGRTLLAGNEAEAAKLAEQYRSLFGEHFYLELQKH
GVPYEELLVPATIRLAEQLGIPLVATNNVHYLDRRDSGCYRAMIANRTKERLNSQNLQCL
PGHENYFKSASEMSALFDNSHDELSNTVKIAEACSYKFVDQDPHLPKFPLPEGFDSEKGY
LRHLTWEGARNKYGVEDGAIPEEVKERIELELGVIEKMGYSAYFLIVSDLIAASREMGYS
VGPGRGSAAGSIIAYLTGITRIDPLKYKLLFERFLNPERISMPDIDIDFTPVGKQKVLDY
TVQKYGAESVAKVVAIGTLGAKAAIRDAGRVLDVPLKAVDQLAKLVPSKPGTSLKDAFKE
VKELKRLVDSDPQYQQLMQYARAMEGRARNVSMHAGAVVITDGALEEQVPLYVSNKIETE
ERKYADEFDQNDIDGTKAESSDEKQVVTQFDKNCIEQAGLLKIDYLGLETLAVIDETLRL
IKKRHGIDIELEKVPMDDRQTFRIFQEGKMAGIFQFESSGMQSYMTRLQPTTIGDIIAMS
ALYRPGALNAVIDEHRNAVDLFVDRKHGREEIDYMHPMLEEILKETYGVIVYQEQVMQIS
QVMGRFSLGKADNLRKAMGKKNPALMQKFKEEFVQGAVSIDVNEALATRIFDLMAEFAGY
GFNKSHSAAYGVLAYWTGYLKAHYTIEFVTAILNSEIGDTERMKHLTDEAKGFGIFTLPP
SINQSDALFSVDEHKGKPCIRVGLSAIKQVGNGARAVVAARLRRDGKPFANLFDLTASVD
LRAMNRKALECLIQAGALDEIDPNRGKLLANVDKAIKFGQIQNKAVTLGQGGFFNDDFSN
EQAGIYYPELDNGEPMPESEKLQHEKRLVGFYLSHHPLDRYRRDWEAFANLTLDMREVTP
SKLYKTIGVIVSVKPYQDRKGKQMLFGVLEDFTGKADFTVFASVYEQYRHMLQPDEAVML
SAEAEARDGSLKLLVREVAPLKKVRSALIKKVMLRIDADDPSQLEKLKEVRELFEKHKGE
TPVDFELRATVGAKIEMLKVFARNTPIEPDDETLNQLEEILGPDNVKITG
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaccagtcaggaaaagtgccttggagttcgttcatcttcacacccacacccactac
tcgatgcagagcagcccgatctttccgggcgagcttttcgcggcctgcaagaagcagggc
atgacgaccgtcgccgtgaccgattacggcgcaatgttcaacatgcccgagctgttcggc
caggcggcgaaggcagaggtgaagctgatcatgggctcggagatctatcttgcgggcacc
gacgcgcacgatacgggccgcccggctacgctcatcctgctcatccgcaatgacatcggc
tatcgcaacatgtgcgtcatcctgtcgcgggcggcgagggatggtttttcaaacggcttg
ccgcatgtggatcgttcagtcctcaaagagtgcagtgaagggttgacctgcctgtcggcg
gctcattccgggcaaatcggccgcacgctgcttgcgggcaacgaagcagaagctgcgaag
ctggcggagcagtaccgttcgctttttggcgagcatttctacctcgaacttcagaagcac
ggtgtgccctacgaggagctgctcgtgcctgccacgatccgtcttgccgaacagctcggc
attccgctggtcgcgaccaacaatgtgcactatctcgatcggcgcgactccggttgctat
cgggcgatgattgccaaccgcaccaaggagcggctgaacagccagaacctgcaatgcctg
ccgggccacgagaactacttcaagtcggcctcggagatgtccgcgctcttcgacaactcg
cacgacgaactcagcaacactgtgaagatcgccgaggcgtgctcctacaagttcgtcgat
caggatccgcatctacctaagttcccgctgccggagggcttcgacagcgagaaggggtat
ctgcgccacctgacctgggagggggcgcgcaacaagtacggcgtggaggacggtgcaatt
ccggaggaggtgaaggagcgcatcgagctggagcttggcgtcatcgagaagatgggttac
agcgcctacttcctgatcgtcagtgaccttatcgccgcttcgcgcgagatgggctactcg
gtcggccccggacgcggctcggcggcgggcagcatcatcgcctacctgaccggcatcacc
cggatcgatccgctgaagtacaagctgctgttcgagcgcttcctgaatccggagcgtatt
tcgatgcccgatatcgacatcgattttacaccggtcggcaagcagaaggttctcgattac
accgtgcagaagtacggtgcggagagcgtggcgaaggtggtggctatcggtacgctcggc
gcgaaggcggcaatccgcgatgcagggcgcgtgctcgatgtgccgctcaaggcagtcgat
cagctcgccaagctggtgccctccaaaccggggacatcgctcaaagacgctttcaaggag
gtcaaagagctgaaacggcttgtcgatagcgatccgcaataccagcagctcatgcagtac
gcgcgggcgatggaagggcgtgcacgcaacgtctcgatgcacgcgggcgcggtggtcatc
accgatggcgcgctcgaagagcaggtgccgctttacgtctccaacaagatcgagaccgag
gagcgcaaatacgccgacgagttcgaccagaatgacatcgacggtacgaaggctgaaagc
agcgacgagaagcaggtcgtcacccagttcgacaagaactgcatcgagcaggcgggtctg
ctgaaaatcgactacctcggcctcgaaaccctcgccgtgatcgacgaaaccctgcggctc
atcaagaagcggcacggcatcgacatcgaactcgaaaaggtgccgatggacgaccgccag
accttccgcatcttccaggagggcaagatggccggcatcttccagtttgaatcctccggc
atgcagagctacatgacgcggctccagccaacgactatcggcgacatcatcgctatgagc
gcgctttaccgacccggcgctctgaacgccgtcatcgacgagcaccgcaacgcggtcgat
ctgtttgttgaccgcaagcacgggcgcgaggagatcgactacatgcacccgatgcttgag
gagattctcaaggagacctacggcgtcatcgtctatcaggaacaggtgatgcagatttcg
caggtgatgggccgcttctcgctcggcaaggcggacaacctgcgcaaggcgatgggcaag
aagaatccggcgctgatgcagaagttcaaggaggagttcgtgcagggtgccgtcagcatc
gatgtcaacgaggctctggcaacgcgcatcttcgacctgatggccgagttcgcgggttat
ggtttcaacaagagccactcggcggcatacggcgtgctggcctactggacgggctacctg
aaggcgcactacaccatcgagttcgtcacggcgatcctgaacagcgagattggcgacacc
gagcgcatgaagcacctgaccgacgaggccaaagggttcggtatcttcaccctgccgccc
tcgatcaaccagagcgatgcgctcttctcggttgacgagcacaagggcaagccctgcatc
cgcgtcggcttgtcggctatcaagcaggttggtaatggggcaagggctgttgttgcggct
cgtctgcgccgtgacggcaagccgttcgccaatctgtttgatctgactgcttcggtcgat
ctgcgagctatgaaccgcaaggcgctcgaatgcctcattcaggccggagcgctcgacgag
atcgatcccaaccgcggcaagctgctggcaaacgtggacaaggccatcaagttcgggcag
attcagaacaaagcggtcacgctgggccagggcggctttttcaacgacgacttcagcaac
gaacaggccggaatctactacccggagctggacaacggcgagcccatgccggagagcgaa
aagctccagcacgaaaagcggcttgtcggtttctacctcagccaccacccgcttgatcgt
taccggcgtgactgggaggcctttgccaacctcacgctcgacatgcgcgaggtgaccccc
tcgaagctctacaagacgatcggagtgatcgtttcggtcaagccctatcaggatcgtaag
ggcaaacagatgctgtttggcgtgctcgaagacttcaccggcaaggctgattttaccgtg
tttgcaagcgtttacgagcagtatcgccacatgcttcagcccgacgaagcggtgatgctt
agcgctgaggctgaagcgcgggacggcagcctgaagctgctggttcgcgaggtcgcaccg
ctcaaaaaggtgcgttccgccctgatcaaaaaggtgatgttgcgcatcgatgccgacgat
ccctcgcagctcgaaaagctcaaagaagtacgcgagctgttcgagaagcacaagggggaa
acaccggtcgatttcgagcttcgggccacagtaggagcgaaaatcgaaatgctgaaggtt
tttgcgcgtaacacgccgattgagcccgatgacgagacactcaaccagctcgaagagatt
ctcgggccagataatgtgaaaataaccggatag
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