Chlorobaculum parvum: Cpar_0972
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Entry
Cpar_0972 CDS
T00725
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpc
Chlorobaculum parvum
Pathway
cpc03030
DNA replication
cpc03430
Mismatch repair
cpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cpar_0972
03430 Mismatch repair
Cpar_0972
03440 Homologous recombination
Cpar_0972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpc03032
]
Cpar_0972
03400 DNA repair and recombination proteins [BR:
cpc03400
]
Cpar_0972
Enzymes [BR:
cpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cpar_0972
DNA replication proteins [BR:
cpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cpar_0972
DNA repair and recombination proteins [BR:
cpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cpar_0972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
Ribosomal_S4
Motif
Other DBs
NCBI-ProteinID:
ACF11380
UniProt:
B3QN77
LinkDB
All DBs
Position
1075483..1076181
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AA seq
232 aa
AA seq
DB search
MIELIQKKLLLRKCRNGELPESVCRYLHRFDEGFRAQTPIEDARFVIYDTETTGFDFRHD
RIISIGAVGTKGEVIDIADSFEVLLRQEVCSERDAVTVHGLLKRDIDSGLEESEAVCRFL
DYLGNAVIVAHHADFDIAMINQVLSRRFGMRLFNEALDTASFAKRLEKGPYYNLAHKGGE
YRLDNLCARYGIRLYDRHTAPGDAYLTAQLFQRLLALGRKAGIDTLGKLLLK
NT seq
699 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagctgatccagaaaaagctgctcttgcggaagtgccggaacggagagctgccg
gagagcgtctgccgctacctgcaccggttcgacgaaggctttcgcgcacagacgccgata
gaggatgcgcgtttcgtcatttacgataccgaaaccaccggattcgatttcaggcatgac
cggatcatttcgatcggcgcggtcggcacgaaaggggaggtgatcgatatcgccgattcg
ttcgaggtgctgcttcgtcaggaggtgtgcagcgagcgcgatgcggtgacggtgcatggc
ctgctcaagcgcgatatcgacagcggtctggaagagagcgaggcggtttgccgttttctg
gactatctcggcaatgcggtgatcgtggcgcatcatgccgatttcgatatcgccatgatc
aatcaggtgctttcgaggcgcttcggaatgcggctcttcaacgaagctctcgatacggcc
agctttgccaaacggcttgaaaaaggtccctactacaaccttgcgcataagggtggtgag
taccgccttgacaacctctgcgcccgttacggcatccgcctctacgaccgccacaccgca
ccaggggacgcctaccttaccgcccagcttttccagcgccttctcgcgcttggccgcaaa
gcgggtatcgatacgctcggcaagctcttgctgaagtga
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