Chlorobaculum parvum: Cpar_1127
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Entry
Cpar_1127 CDS
T00725
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
cpc
Chlorobaculum parvum
Pathway
cpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Cpar_1127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpc03400
]
Cpar_1127
Enzymes [BR:
cpc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Cpar_1127
DNA repair and recombination proteins [BR:
cpc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Cpar_1127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
DEAD
PriA_C
PriA_3primeBD
Helicase_C
PriA_CRR
AAA_16
Helicase_C_2
HTH_34
AAA_19
HTH_20
PIF1
AAA_22
HTH_24
AAA_30
SLFN-g3_helicase
TrwB_AAD_bind
Viral_helicase1
zinc-ribbons_6
Motif
Other DBs
NCBI-ProteinID:
ACF11534
UniProt:
B3QNN1
LinkDB
All DBs
Position
1244114..1246546
Genome browser
AA seq
810 aa
AA seq
DB search
MRAQVYVERIYRDEPFLLSVPEALEERLQTGCQVLVKLGGHRASAYIGYVASLDEQPGEN
AVDGEVLDVLNDGRPVLTPQMMRLALWMSDHYVARPVDCITTALPAPLRNTVDEVIELCD
FRLESPESRIKSTDLRRKILQMLSRDKRLTVRQLRKRLGRKGLYSTLGELERGGLIKITK
RFAETKPRTVTAWRLSPTLPEEPEKLIARSPRKREAFELLFAEPDKPLRAEESGISRAVL
NGLVELGLAEKVEIAAPLKEGLRFDEVQKEITALSRHQQQALDALTGSLEEERFRTFLLH
GVTGSGKTLVYIELLRRVLDSGKTAIVLVPEIALTPQTAARFRHYFGDEIQIIHSAMSDQ
EKYEAWQRLSTGKARIALGARSTLFAPLENVGAIIVDEEHDGAYKQDRTPRYHARDTAVM
RAMFENAICVLGSATPSFESYHNAVESKYALLELPERIDQAQMPKIELVWMPGSQRVTPS
ISGALYDAIRERLKRDEQVILLQNRRGFAGSLLCLECGHTPQCSHCNIPLVYHSTDRTLR
CHYCGHIEPFRETCPSCKSGNLFYKSSGTERIEEELGELFPDEKILRMDIDTTSTKDAHA
TILTAFRNKTARILLGTQMVAKGLDFPDVTLVGVLMADIGLNLPDFRASERIYSLLTQVS
GRAGRASRPGEVLLQLYNRDNELFSHVLKSDYRHFFEAEMLTRKELGYPPFSRLIKFECS
SPSEQAAERGAMALREKIEPVVTEKIGTILGPAPAGMMKMKGRFRFQLILKLFGVRLPSS
LLRQVQYDALGLFRGDNLVITVDVDPQHLL
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcacaggtttacgttgaaagaatctatcgggacgaaccgttcctgttgtcggtg
ccagaggcgctggaagagcgtctgcagaccggttgtcaggtgctggtgaagctcggggga
cacagggcttcggcgtacatcggctacgttgcgtctctggatgaacagccaggcgagaat
gcggtagacggcgaggtgctggacgtgctcaacgacggcaggccggtactgacaccacag
atgatgcggttggcgctctggatgtcggatcactatgtcgcccggcccgtcgactgcatc
accaccgcccttcccgcgccgctgcggaacacggtcgacgaggtgatcgagctgtgcgat
ttccgtctggaaagcccggagtcccgaattaaaagcaccgatttgcgccggaaaattctg
cagatgctgagccgcgacaagcgcctgaccgttcggcagctccgcaaacgcctcggcaga
aaggggctctactccacacttggcgagctcgaaagaggcgggctgattaaaatcaccaag
cgctttgctgaaacaaagccgagaaccgtcacggcatggcggctgagccccacgctcccc
gaagagccagaaaaactgatcgcccgctcgccgcgaaagcgcgaggcgttcgagctgctc
ttcgctgaacccgacaagccgctccgggccgaggaaagcggcatttcgagagcggtactg
aacggactggtcgagctggggctggccgaaaaagtcgaaatcgccgcgccactcaaggag
gggcttcgcttcgacgaagtgcagaaggagatcaccgcgctcagccggcaccagcagcag
gcgctcgacgcgctgaccgggtcgctcgaagaggagcggttccggacgtttctgttgcac
ggcgtgaccggcagcggcaagacgctggtctatatcgagctgctgcgccgggtgctcgac
agcggcaaaacagctatcgtactcgtccccgaaatcgccctcaccccacaaaccgcggcc
cgcttccgccactatttcggtgatgaaatccagatcatacacagcgccatgagcgatcag
gaaaagtacgaggcgtggcaacggctcagtacgggcaaggcgcgcatcgcgctcggcgcg
cgctcgaccctgtttgcaccactggagaatgtcggagcgattatcgtggacgaggaacac
gacggagcatacaagcaggatcgcacaccacgctaccacgctcgcgacacggcggtgatg
cgcgccatgttcgaaaacgccatctgcgtgctcggctcggccacaccatcgttcgagtcg
taccacaatgccgtcgaaagcaaatacgccctgctcgaactgcccgaacgcatcgaccag
gcacaaatgcccaaaatcgagctggtctggatgcccggcagtcagcgcgtcacgccgtcg
atctccggagcgctgtacgacgcaatccgcgaacgcctcaagcgcgacgagcaggtcatc
ctcttgcaaaaccgccgcggctttgcgggcagcctgctctgcctcgaatgcggccacacc
ccgcaatgcagccactgcaacatcccgctggtctaccattcgaccgaccggacgctccgc
tgccactactgcggccacatcgagccgttccgcgaaacctgcccctcgtgcaaatccggc
aatctgttctacaaaagcagcggcacagagcgcatcgaggaggagctgggtgaactgttt
ccggatgagaagattttgcggatggacatcgacaccacctctaccaaagacgcccacgcc
acgattctgaccgccttccgcaacaaaaccgctcggattctcctcggcacccagatggtg
gccaaggggctggactttccggacgtcacgctggttggcgtgctgatggccgacataggc
ctgaacctgccggacttccgcgcctcggagcgcatctactcgctgctgacgcaggtgtcg
ggacgagcaggacgagcatcgagacctggcgaagtgctgcttcaactctacaaccgcgac
aacgagctgttcagccacgtactgaaaagcgactaccggcatttcttcgaagccgagatg
ctcacccgcaaagagcttggctatccgcctttttcgagactcatcaagttcgagtgctcc
tcaccctccgaacaggccgccgaacgcggcgcaatggcgctccgggaaaaaatcgaaccg
gtcgtaaccgaaaagatcggcacgattctcggccccgcgccggcaggtatgatgaaaatg
aaagggcggttccgctttcagctcatcctgaaactcttcggcgtccgtttgccaagctcg
ctcctcagacaggtacagtacgacgcactcggccttttccgaggtgacaacctggtcatc
accgtcgatgtcgatccccagcatcttctgtaa
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