Chlorobaculum parvum: Cpar_1342
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Entry
Cpar_1342 CDS
T00725
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
cpc
Chlorobaculum parvum
Pathway
cpc03030
DNA replication
cpc03430
Mismatch repair
cpc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Cpar_1342
03430 Mismatch repair
Cpar_1342
03440 Homologous recombination
Cpar_1342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpc03032
]
Cpar_1342
03400 DNA repair and recombination proteins [BR:
cpc03400
]
Cpar_1342
Enzymes [BR:
cpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Cpar_1342
DNA replication proteins [BR:
cpc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Cpar_1342
DNA repair and recombination proteins [BR:
cpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Cpar_1342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
RCF1-5-like_lid
AAA_14
AAA_30
AAA_16
DUF7090
AAA_assoc_2
RuvB_N
AAA_18
TsaE
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ACF11745
UniProt:
B3QP92
LinkDB
All DBs
Position
complement(1458161..1459333)
Genome browser
AA seq
390 aa
AA seq
DB search
MSYQVIARKYRPSRFADITAQEHITGTIQNSLRMGRVGHGYIFSGLRGVGKTTAARVFAK
AVNCQRMIEDPKYLKEVTEPCGECESCRDFDAGASLNISEFDAASNNSVDDIRLLRENVR
YGPQKGRYRVYIIDEVHMLSTAAFNAFLKTLEEPPPHAIFIFATTELHKIPATIASRCQR
FNFKRIPISEIQRQLQFICDAEGISADDDALQLIARKAQGSMRDAQSILDQVIAFAIDSE
GERAIRYDKVSDLLSYIDDEHFFMVTDAIVSGDAAAMLDVAGMVNRNGYDEQDFLEKLIE
HFRNFLVIHNLRSSRLIERPEPVKERYERDALKLTPEVIMAMTDLLMQTQRELKFYAEHQ
FRFELALLKLIALGQGTTTADEKKKPILSL
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtcatagcacgaaaatacagaccttcacgatttgccgatataaccgcg
caggagcatatcaccggcacgatccagaactccctcagaatggggcgggtcggccacggc
tacatcttttccggccttcgcggcgtgggcaagaccacggcggcgcgcgtgttcgccaaa
gcggtgaactgccagcgcatgatcgaggacccgaagtacctcaaagaggtcaccgagccg
tgcggtgagtgcgagagctgccgcgacttcgacgcgggagcgagcctgaatatttccgag
tttgatgcggcttcgaacaacagcgtggacgacatccgcctgcttcgcgagaacgtgcgc
tacggcccgcagaaaggacgctatcgcgtctacatcatcgacgaggtgcacatgctctcg
acggcggcgttcaacgcttttctcaagacgctcgaagagccgccgccgcatgcgatcttc
attttcgcgaccaccgagctgcacaagattccggccacgatcgcctcgcgatgccagcgc
ttcaacttcaagcgtatcccgatttcggagattcagcgccagcttcagttcatctgcgat
gccgagggaattagcgcggatgatgatgcattgcagctcatcgcgcgcaaggcgcagggc
tcgatgcgcgacgcccagagcattctcgaccaggtaatagcctttgccatcgacagtgaa
ggggagcgggcgatccgctacgataaggtctccgacctgctgagctacatcgacgacgag
cactttttcatggtgactgacgccatcgtttccggagacgctgccgccatgctcgacgtg
gccggcatggtcaaccgcaacggttacgacgagcaggattttctcgaaaagctgatcgag
catttccgcaacttccttgtcattcacaatctgcgctccagccgcctgatcgaacggccc
gaaccggtcaaggagcgttacgagcgcgacgcgctgaagctgacgcccgaggtgatcatg
gctatgaccgatctgctcatgcagacgcagcgtgagctgaaattctatgccgaacatcag
ttccgcttcgaactcgcgctgctcaagctcatcgctttggggcagggaaccacaacggcg
gatgaaaaaaaaaagccgattctgagcctgtag
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