KEGG   Chlorobaculum parvum: Cpar_1369
Entry
Cpar_1369         CDS       T00725                                 
Name
(GenBank) excinuclease ABC, A subunit
  KO
K03701  excinuclease ABC subunit A
Organism
cpc  Chlorobaculum parvum
Pathway
cpc03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:cpc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    Cpar_1369
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cpc03400]
    Cpar_1369
DNA repair and recombination proteins [BR:cpc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Cpar_1369
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      Cpar_1369
SSDB
Motif
Pfam: ABC_tran UvrA_DNA-bind SMC_N AAA_21 AAA_29 UvrA_inter AAA_16 RsgA_GTPase nSTAND1 DnaJ_CXXCXGXG DUF4350 nSTAND3 AAA_23 cobW AAA_15 Viral_helicase1 HUTI_composite_bact
Other DBs
NCBI-ProteinID: ACF11771
UniProt: B3QPB8
LinkDB
Position
complement(1484037..1486904)
AA seq 955 aa
MSSTQNRTESNTSIASTENGAETRLPDIVLRGVSTHNLKHVTVRIPRNRFVVLTGLSGSG
KSSLAFDTLYAEGHRRYVESLSAYVRQFLERMPKPEIESVEGIAPAIAIEQKAIPKNPRS
TVGTVSEIYDYLRLLYARIGKIYSRDTGELVLKHTPEDVSLQARFFEDRTRFYVGYPFPS
HHDLKHHDRTVAEELKNLLKKGFFRLLKDETVLDISDEKVRAGVEKLKRDELSNLLVLVD
RFAAKKDEKVYSRVAQAAETCFAESDGHAIIRVAGGKEYRFSDRLELNGVVYQEPSPQLF
AFNSPIGACTACQGFGRIAGIDEDAVIPDKSLSLKEGAISCWNSEKYSWYRKQLLNIAPE
VGIPVDVPYEKLSRVHREMVWKGIPERSFKGVRPFFEEIEKDAGYKVHYRVFLSRYRGYA
TCPECEGARLNPDALQVRVSGRNIGEVVRMTIADAQEFFQGLDISPFDRSVADSVLREIN
KRLGYLMDVGLDYLTLDRLTHTLSGGEFQRINLSTSLGSPLVGAIYILDEPSIGLHQSDS
ARLVALLKRLRDLGNTVVVVEHDREIIEAADEVIDLGPRAGRLGGEVVFHGPPSAMAGAT
GSLTADYLSDRKKIAVPAERRTPDFSRCIEITGAMQNNLRNIDVRFPLGVMTCITGVSGS
GKSTLVNDILKLGIIREKEGSREKVGTHRAIKGVELIEKVEHVDQSPIGKSSRSNPATYL
KIFDDIRQLFASTRESKSRGWKPGYFSFNIPGGRCETCAGEGTVKIEMQFLADIEAVCEE
CEGKRYKSSTLEVKYNGLSIDEVLDLTVEEAITFFRSEKSIQKKLKVLQDVGLEYIRLGQ
SSSTLSGGEAQRLKLAHFISRSDVSNTLFIFDEPTTGLHFDDIDKLVRCFEELMARGNTL
VIIEHNPDIIKQADWIIDLGPGAGVRGGEVVAVGTPEEIRDCEASLTGRHLKGYV
NT seq 2868 nt   +upstreamnt  +downstreamnt
atgtcatccactcagaaccgtaccgaatcaaatacatccatcgcaagcacggagaatgga
gctgaaacaaggcttcccgacatcgtgcttcgcggcgtttcgacgcataacctcaagcat
gtcaccgttcgtattccccgcaaccggtttgtcgttctgaccggcttgagcggttctggc
aagtcgagcctggcgttcgatacgctctatgccgaaggccatcggcgctacgtcgagtcg
ctttcggcctacgtgcggcagtttctcgaacggatgcccaagcctgagatcgagagcgtc
gagggaatcgcgccagctatcgccatcgagcagaaggcgattccgaagaatccccgttcg
acggtcggcaccgtctctgaaatctacgactacctgcgactgctttatgcgcgaatcggc
aagatctattcgcgcgacaccggcgagctggtgctgaagcacacgcctgaggatgtgagt
ttgcaggcgcggttcttcgaggatcgtacgcgcttttatgtgggctatccttttcccagc
catcacgacctcaagcatcacgatcgtaccgtggctgaggagctgaagaatcttttgaag
aagggctttttcaggctgctcaaggatgagaccgtactcgatatttcggatgagaaggtt
cgcgccggggtggaaaagctcaagcgcgatgaactgtcgaatctgctggtgctggttgac
cggtttgccgccaaaaaggatgagaaagtttacagccgtgtcgcacaggctgccgagacc
tgctttgccgagtcggatggccacgccatcattcgcgtcgccggaggcaaggagtaccgc
ttcagcgaccggctggagctgaacggcgtggtttatcaggagccgtcgccgcagctcttc
gcgttcaactcgcccatcggggcgtgcacggcatgtcaagggttcggtcggatcgcgggc
atcgatgaggatgcggtcattcccgacaaatcgctgagcctgaaggagggcgcgatttcg
tgctggaactccgagaagtattcgtggtatcgcaagcagttgctgaacattgcgcccgaa
gtgggcattcctgtcgatgtgccgtacgaaaagctcagccgcgtgcatcgcgagatggtc
tggaagggcattccggagcggagtttcaagggcgtgcgcccatttttcgaggagatcgaa
aaggatgcaggctacaaggtgcattaccgggtgttcctgagtcgctaccggggctacgcc
acctgtccggagtgcgagggagcgcggctcaatcccgacgccttgcaggtacgggtctcc
ggcaggaacatcggcgaagtcgtgcgtatgaccatcgccgatgcgcaggagtttttccag
gggctcgacatttcgcctttcgaccgctcggtggccgactcggtgctgcgcgagatcaac
aagcggctcggctacctgatggatgtcgggcttgactacctcacgctcgaccggctgacg
cacaccctctccggcggcgagttccagcgcatcaacctttcgacctcgctcggctcaccg
ctggtgggcgcaatctacattctcgacgagccgagcatcggcctgcaccagagcgactcg
gcgcggctcgtggcgctgctcaagcggctgcgcgacctcggcaacacggtggtggtggtc
gagcacgaccgcgaaatcatcgaggctgccgacgaggtgatcgacctcggcccgcgcgcc
ggacggctcgggggcgaggtggtgttccacggcccgccgtcggcgatggcaggggcgacg
ggatcgctgactgccgattatctcagtgatcgcaaaaagatcgctgtgcctgccgagcgg
cgcacgccggacttttcgcgctgcattgaaatcaccggcgcgatgcagaacaacctgcgc
aacattgacgttcgattcccgctcggcgtcatgacctgcatcaccggcgtgagcggctcg
ggcaaatcgacgctcgtgaacgacatcctcaagctcggtatcatccgtgaaaaagagggt
tcgcgcgagaaggttggcacgcaccgggccatcaagggcgtcgagctgatcgagaaggtc
gagcatgtcgatcagtcgcccatcggcaaatcgagccgcagcaatccggccacctacctc
aagattttcgacgacatccgtcagctcttcgcctcgacccgcgagagcaagtcacgcggc
tggaagcctggctacttctcgttcaacatccccggcgggcgctgcgaaacctgcgcgggc
gaaggtacggtcaagatcgagatgcagtttctggccgacatcgaggcggtgtgcgaagag
tgcgagggcaaacgctataaatcctcgacgctggaggtgaagtacaacggtctgtcgatc
gacgaggtgcttgatctgaccgtcgaggaggcgatcacctttttcaggtcggaaaagtcg
attcagaagaagctcaaagtgttgcaggatgtggggcttgaatacatccgcctcggccag
tcatccagcacgctttccggcggcgaggcgcagcgactgaagctcgcgcactttatctca
cgctccgacgtgagcaacacgctcttcatctttgacgagcctaccaccggcctccacttc
gacgacatcgacaagctggtgcgctgcttcgaggagctgatggcgcgcggcaacacactg
gtcatcatcgagcacaatcccgacatcatcaaacaggctgattggatcatcgacctcggc
cccggcgcaggtgtgcgtggtggcgaggtggtcgccgtcggtacacccgaagagattcgt
gattgcgaagcttccctgacgggcaggcatttgaaggggtacgtgtag

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