Chlorobaculum parvum: Cpar_1369
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Entry
Cpar_1369 CDS
T00725
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
cpc
Chlorobaculum parvum
Pathway
cpc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Cpar_1369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpc03400
]
Cpar_1369
DNA repair and recombination proteins [BR:
cpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cpar_1369
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Cpar_1369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
SMC_N
AAA_21
AAA_29
UvrA_inter
AAA_16
RsgA_GTPase
nSTAND1
DnaJ_CXXCXGXG
DUF4350
nSTAND3
AAA_23
cobW
AAA_15
Viral_helicase1
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
ACF11771
UniProt:
B3QPB8
LinkDB
All DBs
Position
complement(1484037..1486904)
Genome browser
AA seq
955 aa
AA seq
DB search
MSSTQNRTESNTSIASTENGAETRLPDIVLRGVSTHNLKHVTVRIPRNRFVVLTGLSGSG
KSSLAFDTLYAEGHRRYVESLSAYVRQFLERMPKPEIESVEGIAPAIAIEQKAIPKNPRS
TVGTVSEIYDYLRLLYARIGKIYSRDTGELVLKHTPEDVSLQARFFEDRTRFYVGYPFPS
HHDLKHHDRTVAEELKNLLKKGFFRLLKDETVLDISDEKVRAGVEKLKRDELSNLLVLVD
RFAAKKDEKVYSRVAQAAETCFAESDGHAIIRVAGGKEYRFSDRLELNGVVYQEPSPQLF
AFNSPIGACTACQGFGRIAGIDEDAVIPDKSLSLKEGAISCWNSEKYSWYRKQLLNIAPE
VGIPVDVPYEKLSRVHREMVWKGIPERSFKGVRPFFEEIEKDAGYKVHYRVFLSRYRGYA
TCPECEGARLNPDALQVRVSGRNIGEVVRMTIADAQEFFQGLDISPFDRSVADSVLREIN
KRLGYLMDVGLDYLTLDRLTHTLSGGEFQRINLSTSLGSPLVGAIYILDEPSIGLHQSDS
ARLVALLKRLRDLGNTVVVVEHDREIIEAADEVIDLGPRAGRLGGEVVFHGPPSAMAGAT
GSLTADYLSDRKKIAVPAERRTPDFSRCIEITGAMQNNLRNIDVRFPLGVMTCITGVSGS
GKSTLVNDILKLGIIREKEGSREKVGTHRAIKGVELIEKVEHVDQSPIGKSSRSNPATYL
KIFDDIRQLFASTRESKSRGWKPGYFSFNIPGGRCETCAGEGTVKIEMQFLADIEAVCEE
CEGKRYKSSTLEVKYNGLSIDEVLDLTVEEAITFFRSEKSIQKKLKVLQDVGLEYIRLGQ
SSSTLSGGEAQRLKLAHFISRSDVSNTLFIFDEPTTGLHFDDIDKLVRCFEELMARGNTL
VIIEHNPDIIKQADWIIDLGPGAGVRGGEVVAVGTPEEIRDCEASLTGRHLKGYV
NT seq
2868 nt
NT seq
+upstream
nt +downstream
nt
atgtcatccactcagaaccgtaccgaatcaaatacatccatcgcaagcacggagaatgga
gctgaaacaaggcttcccgacatcgtgcttcgcggcgtttcgacgcataacctcaagcat
gtcaccgttcgtattccccgcaaccggtttgtcgttctgaccggcttgagcggttctggc
aagtcgagcctggcgttcgatacgctctatgccgaaggccatcggcgctacgtcgagtcg
ctttcggcctacgtgcggcagtttctcgaacggatgcccaagcctgagatcgagagcgtc
gagggaatcgcgccagctatcgccatcgagcagaaggcgattccgaagaatccccgttcg
acggtcggcaccgtctctgaaatctacgactacctgcgactgctttatgcgcgaatcggc
aagatctattcgcgcgacaccggcgagctggtgctgaagcacacgcctgaggatgtgagt
ttgcaggcgcggttcttcgaggatcgtacgcgcttttatgtgggctatccttttcccagc
catcacgacctcaagcatcacgatcgtaccgtggctgaggagctgaagaatcttttgaag
aagggctttttcaggctgctcaaggatgagaccgtactcgatatttcggatgagaaggtt
cgcgccggggtggaaaagctcaagcgcgatgaactgtcgaatctgctggtgctggttgac
cggtttgccgccaaaaaggatgagaaagtttacagccgtgtcgcacaggctgccgagacc
tgctttgccgagtcggatggccacgccatcattcgcgtcgccggaggcaaggagtaccgc
ttcagcgaccggctggagctgaacggcgtggtttatcaggagccgtcgccgcagctcttc
gcgttcaactcgcccatcggggcgtgcacggcatgtcaagggttcggtcggatcgcgggc
atcgatgaggatgcggtcattcccgacaaatcgctgagcctgaaggagggcgcgatttcg
tgctggaactccgagaagtattcgtggtatcgcaagcagttgctgaacattgcgcccgaa
gtgggcattcctgtcgatgtgccgtacgaaaagctcagccgcgtgcatcgcgagatggtc
tggaagggcattccggagcggagtttcaagggcgtgcgcccatttttcgaggagatcgaa
aaggatgcaggctacaaggtgcattaccgggtgttcctgagtcgctaccggggctacgcc
acctgtccggagtgcgagggagcgcggctcaatcccgacgccttgcaggtacgggtctcc
ggcaggaacatcggcgaagtcgtgcgtatgaccatcgccgatgcgcaggagtttttccag
gggctcgacatttcgcctttcgaccgctcggtggccgactcggtgctgcgcgagatcaac
aagcggctcggctacctgatggatgtcgggcttgactacctcacgctcgaccggctgacg
cacaccctctccggcggcgagttccagcgcatcaacctttcgacctcgctcggctcaccg
ctggtgggcgcaatctacattctcgacgagccgagcatcggcctgcaccagagcgactcg
gcgcggctcgtggcgctgctcaagcggctgcgcgacctcggcaacacggtggtggtggtc
gagcacgaccgcgaaatcatcgaggctgccgacgaggtgatcgacctcggcccgcgcgcc
ggacggctcgggggcgaggtggtgttccacggcccgccgtcggcgatggcaggggcgacg
ggatcgctgactgccgattatctcagtgatcgcaaaaagatcgctgtgcctgccgagcgg
cgcacgccggacttttcgcgctgcattgaaatcaccggcgcgatgcagaacaacctgcgc
aacattgacgttcgattcccgctcggcgtcatgacctgcatcaccggcgtgagcggctcg
ggcaaatcgacgctcgtgaacgacatcctcaagctcggtatcatccgtgaaaaagagggt
tcgcgcgagaaggttggcacgcaccgggccatcaagggcgtcgagctgatcgagaaggtc
gagcatgtcgatcagtcgcccatcggcaaatcgagccgcagcaatccggccacctacctc
aagattttcgacgacatccgtcagctcttcgcctcgacccgcgagagcaagtcacgcggc
tggaagcctggctacttctcgttcaacatccccggcgggcgctgcgaaacctgcgcgggc
gaaggtacggtcaagatcgagatgcagtttctggccgacatcgaggcggtgtgcgaagag
tgcgagggcaaacgctataaatcctcgacgctggaggtgaagtacaacggtctgtcgatc
gacgaggtgcttgatctgaccgtcgaggaggcgatcacctttttcaggtcggaaaagtcg
attcagaagaagctcaaagtgttgcaggatgtggggcttgaatacatccgcctcggccag
tcatccagcacgctttccggcggcgaggcgcagcgactgaagctcgcgcactttatctca
cgctccgacgtgagcaacacgctcttcatctttgacgagcctaccaccggcctccacttc
gacgacatcgacaagctggtgcgctgcttcgaggagctgatggcgcgcggcaacacactg
gtcatcatcgagcacaatcccgacatcatcaaacaggctgattggatcatcgacctcggc
cccggcgcaggtgtgcgtggtggcgaggtggtcgccgtcggtacacccgaagagattcgt
gattgcgaagcttccctgacgggcaggcatttgaaggggtacgtgtag
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