Chlorobaculum parvum: Cpar_1882
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Entry
Cpar_1882 CDS
T00725
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
cpc
Chlorobaculum parvum
Pathway
cpc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
cpc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Cpar_1882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpc03021
]
Cpar_1882
03400 DNA repair and recombination proteins [BR:
cpc03400
]
Cpar_1882
Enzymes [BR:
cpc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Cpar_1882
Transcription machinery [BR:
cpc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Cpar_1882
DNA repair and recombination proteins [BR:
cpc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Cpar_1882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RPOC_hybrid
Biotin_lipoyl_2
Apocytochr_F_C
Motif
Other DBs
NCBI-ProteinID:
ACF12274
UniProt:
B3QQS1
LinkDB
All DBs
Position
complement(2071226..2075710)
Genome browser
AA seq
1494 aa
AA seq
DB search
MIFSQGSSPIKGDFSKIKFSIASPESILAHSRGEVLKPETINYRTFKPERDGLMCEKIFG
PTKDWECYCGKYKRVRYKGIICDRCGVEVTTKNVRRERMGHISLAVPVVHTWFFRSVPSK
IGALLDLSTKELERIIYYEVYVVINPGEPGEKQGIKKFDRLTEEQYFQIITEYEDNQDLE
DNDPAKFVAKMGGEAIHTLLKGLNLDEIAVNLRKVLKESGSEQKRADALKRLKVVESFRK
SYEPQKRTRKKSTGLFPEEDSPELYIYEGNKPEYMVMEVVPVIPPELRPLVPLEGGRFAT
SDLNDLYRRVIIRNNRLKKLIDIRAPEVILRNEKRMLQEAVDALFDNSRKANAVKTGESN
RPLKSLSDALKGKQGRFRQNLLGKRVDYSGRSVIVVGPELQLHQCGLPKSMAIELFQPFV
IRRLVERGIAKSVKSAKKLIDKKDPVVWDVLEKVIDGRPVLLNRAPTLHRLGIQAFQPTL
IEGKAIQLHPLVCTAFNADFDGDQMAVHVPLSQEAQLEASLLMLSSHNLILPQSGKPVTV
PSQDMVLGMYYLTKARFGDVGQGQLFYSMEEVIIAYNEERAGLHAQIFVKYDGKVDQVSD
PVRLVDTLVPEEQAERRAWLKSQIEQKKVLVTTVGRVIFNQHMPEKIGFINKLINKKVAK
ELIAHLSSQVGNVETAQFLDNIKAVGFGYAMRGGLSIGLSDAIVPETKVKHIKNAQRDSA
KVVKEYNRGTLTDNERYNQIVDVWQKTSNLVADESYQKLKNDRDGFNPLYMMLDSGARGS
REQVRQLTGMRGLIARPQKSMSGQPGEIIENPIISNLKEGLTVLEYFISTHGARKGLSDT
SLKTADAGYLTRRLHDVAQDVIVTIDDCGTTRGLHVERNIEEETSGQIKFREKIKGRVAA
RDIVDVINDKVVVKAGEIITDELAAAIQDNIGVEEAEIRSVLTCESKVGICSKCYGTNLS
VHKLVEMGEAVGVIAAQSIGEPGTQLTLRTFHQGGAAQGGISETETKAFYEGQVELEDVK
SVEHSIITEDGIEETRQIVIQKNGKLNIIDPDSGKVLKRYVVPHGAHINVENGQMVRKDQ
VLFSSEPNSTQILAEMPGFAKFIDIEKGVTYKEEVDPQTGFAQHTIINWRSKLRASETRE
PRIAIVSESGEIKKTYPVPIKSNLYVEDGQKLNPGDTIAKVPRNLDRVGGDITAGLPKVT
ELFEARIPTDPAIVSEIDGYVSFGSQRRSSKEIKVKNDFGEEKTYYVQVGKHVLATEGDE
VKAGDPLTDGAVSPQDILRIQGPNAVQQYLVNEIQKVYQINAGVEINDKHLEVIVRQMLQ
KVRVEEAGDTNLLPGDLIDRGTFIEANEAVAEKVRVIDRGDAPPRIQEGQLYKQRDITKL
NRELRRNSKSLITIEPALQATSHPVLLGITSAALQTESVISAASFQETTKVLTDAAVAGK
VDHLAGLKENVIVGKLIPAGTGLRKYRSIRLQSNEPEEVDVIESASTGDAEEEN
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgatattttcacagggatcatcaccgatcaagggtgatttttcgaagataaagttcagc
atcgcctctccggagagcattctggcccattcgcgtggcgaggtgctcaagccggaaaca
atcaactatcgtaccttcaagccggaacgtgatggcctgatgtgcgaaaagattttcggt
cccaccaaggactgggagtgctactgcggcaaatacaagagggtgcgctacaaaggcatc
atctgcgatcgttgtggcgttgaagtcaccaccaaaaacgtgcgccgcgagcgcatgggc
cacatttcgctggccgtaccggtggtgcatacctggtttttccgctccgtgccgagcaag
atcggtgcgctgctcgatctttcgaccaaggagctcgagcgcattatctattatgaagtc
tacgtggtcatcaaccccggtgagcccggcgagaagcagggcatcaagaagttcgaccgc
ctgaccgaggagcagtacttccagattatcaccgagtacgaagacaaccaggacctcgaa
gataacgatccggccaagttcgtcgccaagatgggcggcgaggcgatccacacgctgctg
aaaggcttgaacctcgacgagatcgcggtcaacctccgcaaggtgctcaaggagagcggc
tcggagcagaagcgtgccgatgcgctcaaacgcctcaaggttgtagaatccttccgcaaa
agctacgagccccagaagcgtacccgcaagaaatcgaccggcctgttccccgaggaggat
tctcctgagctgtacatctacgaaggtaacaagcccgagtacatggtgatggaggtcgtg
ccggtgattccgccggagcttcgtccgctcgtgccgctcgaaggtggccgtttcgccacg
tccgatctgaacgatctgtatcgccgcgtcattatccgcaacaaccgcctcaaaaagctg
atcgacattcgcgctcccgaggtcatcctccgcaacgaaaagcgcatgttgcaggaagcc
gttgatgccttgttcgacaactcgcgcaaagccaacgcagtcaaaaccggtgaatccaac
cgtccgctcaagtcgctctccgacgccctcaagggcaagcagggtcgcttccgccagaac
ctgctcggtaagcgtgttgactactccggccgttcggttattgtggtcggcccggagctt
cagctccatcagtgcggtttgccgaagagcatggccatcgagctgttccagccgttcgtt
attcgtcgtctcgtcgagcgcggcatcgccaaatcggtcaaatcggccaagaagctgatc
gacaagaaagacccggtggtctgggatgtgctcgaaaaggtgatcgacggtcgtccggtg
ctgctgaaccgtgctccgaccctgcaccgtctcggtatccaggctttccagcctaccctc
atcgagggcaaggcgatccagcttcacccgctcgtctgtacggcgttcaacgctgacttc
gacggtgaccagatggctgtgcacgtaccgctttcgcaggaagcgcagctcgaagcatcg
ctcttgatgctctcgtcgcacaacctcattctgccgcagtccggtaagccggttacggtt
ccttcgcaggacatggtgctcggtatgtactacctgaccaaggcgcgtttcggagatgta
ggccagggacagctcttctactcgatggaagaggtgatcatcgcctacaacgaggagcgc
gcaggtctccatgcccagattttcgtcaagtacgacggcaaggtcgaccaggtctccgac
ccggttcgcctggtcgatacgcttgtccccgaagaacaggcagaaaggagagcgtggctg
aagagccagatcgagcagaagaaggtgctggtcaccacggttggcagagttatcttcaac
cagcacatgcctgaaaagatcggcttcatcaacaagctgatcaataaaaaagtggcaaaa
gagctgattgctcatctttcaagccaggtcggtaacgtcgaaacggcgcagttcctcgac
aacatcaaggcggtcggctttggctacgccatgaggggcggcctttccatcggtctgtcc
gatgcgatcgtgccggagaccaaggtcaagcatatcaagaacgcccagcgcgacagcgcc
aaggtggtcaaggagtacaaccgtggtacgctgaccgacaacgaacgctacaaccagatc
gttgacgtctggcagaagacttcgaacctggtcgctgacgagtcgtaccagaagctcaag
aatgatcgcgacggcttcaatccgctctacatgatgctcgattcgggtgctcgtggctcc
cgcgagcaggtcaggcagctgaccggtatgaggggtctgatcgctcgcccgcagaagtcc
atgtccggccagccgggtgagattatcgagaacccgattatctcgaacctcaaggaggga
ctgacggtgctcgagtacttcatctcaacgcacggtgcccgtaagggtctgtccgatacc
tcgctcaagacggctgacgccggttacctgaccaggcgtctgcacgacgtggcgcaggat
gtgatcgtcaccatcgacgactgcggcaccacgcgcggtctgcacgtcgagcgcaacatc
gaggaggagaccagcgggcagatcaagttccgcgaaaaaatcaaggggcgcgtggcggcc
cgcgacatcgtcgatgtcattaacgacaaggtggttgtcaaggctggtgaaattatcacc
gatgagcttgccgccgccattcaggacaacatcggcgtcgaagaggccgagattcgttcc
gtgctcacctgcgagtcgaaggttggtatctgctcgaagtgctacggcaccaacctgtcg
gtccacaagcttgtggagatgggcgaagcggtcggcgtgatcgcagcccagtccatcggt
gagccaggaacgcagctgacgcttcgtaccttccaccagggcggtgcggcgcagggcggt
atttccgaaaccgagaccaaggcgttctacgaaggtcaggtcgagctcgaggatgtcaag
agcgtcgagcactccatcatcaccgaggacggcatcgaggagactcgccagatcgtcatc
cagaagaacggcaagctcaacatcatcgaccccgattcgggcaaggtgctgaagcgttac
gtcgtgcctcacggcgcgcacatcaacgtcgagaacggccagatggtgcgcaaggatcag
gtgctattcagcagcgagccgaacagcacgcagattctcgccgagatgcccggttttgcg
aaatttatcgacatcgaaaaaggcgtcacctacaaggaagaggtcgacccgcagaccggc
tttgcccagcacaccattatcaactggcgctccaagcttcgtgcatccgagacccgtgag
ccgcgtattgcaattgtgagcgagtcgggcgaaatcaagaagacctatccggtgccgatc
aagtccaacctctatgtcgaggatggccagaagctgaatccgggtgacaccattgccaag
gtgccgaggaaccttgaccgcgtcggcggcgacatcaccgccggtctgccaaaggtgacc
gagcttttcgaggcacgcatcccgaccgatccggcaatcgtttccgaaatcgacggttac
gtgagcttcggctcgcagcgccgcagcagcaaggagatcaaggtcaagaacgactttggt
gaagagaagacctactacgtccaggttggtaagcacgtgctggccaccgagggcgacgag
gtcaaggccggtgatccgctgaccgacggcgcggtttctccgcaggacattctgcgaatc
cagggccccaacgctgtgcagcagtacttggtaaacgagattcagaaggtttatcagatc
aacgccggtgtggagatcaacgacaagcaccttgaggtgatcgtgcgccagatgctgcag
aaggtacgcgtcgaggaggccggtgataccaatctgcttccgggtgacctgatcgacagg
ggcaccttcattgaagccaacgaagctgtggcagaaaaggtaagggtgattgatcgtggc
gacgctccgccgagaatccaggaggggcagctttacaagcagcgcgacatcaccaagctg
aatcgcgagctacgccgcaacagcaagtcgctcattactatcgagccagcgctgcaggca
acctcgcatccggtgttactgggtattaccagcgccgccttgcagaccgaaagcgtcatc
tctgcagcctctttccaggagaccaccaaggtgctgaccgatgcagccgtggctggcaag
gtcgatcatctcgccggtctgaaagagaatgttattgttggtaagcttattcctgccggt
accggattgcgcaaataccgctcaatcaggcttcagtccaacgaacctgaagaggtcgac
gtcattgagtcagcttcgactggagatgcagaggaggagaactaa
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integrated database retrieval system
