Clostridium perfringens 13: CPE0173
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Entry
CPE0173 CDS
T00074
Name
(GenBank) collagenase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
cpe
Clostridium perfringens 13
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpe01002
]
CPE0173
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
cpe02042
]
CPE0173
Enzymes [BR:
cpe01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
CPE0173
Peptidases and inhibitors [BR:
cpe01002
]
Metallo peptidases
Family M9
CPE0173
Bacterial toxins [BR:
cpe02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
CPE0173
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
ColG_sub
PKD_4
PPC
PKD
K319L-like_PKD
7TMR-HDED
ChitinaseA_N
DUF4625
Motif
Other DBs
NCBI-ProteinID:
BAB79879
UniProt:
P43153
LinkDB
All DBs
Position
222495..225809
Genome browser
AA seq
1104 aa
AA seq
DB search
MKKNLKRGELTKLKLVERWSATFTLAAFILFNSSFKVLAADKKVENSNNGQITREINADQ
ISKTELNNEVATDNNRPLGPSIAPSRARNNKIYTFDELNRMNYSDLVELIKTISYENVPD
LFNFNDGSYTFFSNRDRVQAIIYGLEDSGRTYTADDDKGIPTLVEFLRAGYYLGFYNKQL
SYLNTPQLKNECLPAMKAIQYNSNFRLGTKAQDGVVEALGRLIGNASADPEVINNCIYVL
SDFKDNIDKYGSNYSKGNAVFNLMKGIDYYTNSVIYNTKGYDAKNTEFYNRIDPYMERLE
SLCTIGDKLNNDNAWLVNNALYYTGRMGKFREDPSISQRALERAMKEYPYLSYQYIEAAN
DLDLNFGGKNSSGNDIDFNKIKADAREKYLPKTYTFDDGKFVVKAGDKVTEEKIKRLYWA
SKEVKAQFMRVVQNDKALEEGNPDDILTVVIYNSPEEYKLNRIINGFSTDNGGIYIENIG
TFFTYERTPEESIYTLEELFRHEFTHYLQGRYVVPGMWGQGEFYQEGVLTWYEEGTAEFF
AGSTRTDGIKPRKSVTQGLAYDRNNRMSLYGVLHAKYGSWDFYNYGFALSNYMYNNNMGM
FNKMTNYIKNNDVSGYKDYIASMSSDYGLNDKYQDYMDSLLNNIDNLDVPLVSDEYVNGH
EAKDINEITNDIKEVSNIKDLSSNVEKSQFFTTYDMRGTYVGGRSQGEENDWKDMNSKLN
DILKELSKKSWNGYKTVTAYFVNHKVDGNGNYVYDVVFHGMNTDTNTDVHVNKEPKAVIK
SDSSVIVEEEINFDGTESKDEDGEIKAYEWDFGDGEKSNEAKATHKYNKTGEYEVKLTVT
DNNGGINTESKKIKVVEDKPVEVINESEPNNDFEKANQIAKSNMLVKGTLSEEDYSDKYY
FDVAKKGNVKITLNNLNSVGITWTLYKEGDLNNYVLYATGNDGTVLKGEKTLEPGRYYLS
VYTYDNQSGTYTVNVKGNLKNEVKETAKDAIKEVENNNDFDKAMKVDSNSKIVGTLSNDD
LKDIYSIDIQNPSDLNIVVENLDNIKMNWLLYSADDLSNYVDYANADGNKLSNTCKLNPG
KYYLCVYQFENSGTGNYIVNLQNK
NT seq
3315 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaacttaaaaaggggagagctaacaaaactgaagttagttgaaagatggtca
gctacctttactttagcagcatttattttatttaatagctcatttaaagtacttgcagct
gataaaaaggtagagaatagtaataatggacagattactagagagattaatgctgatcag
atttctaaaacagaattaaataatgaggtagctacagacaataatagaccattaggacct
agtattgctccatcaagagcaagaaacaacaagatctatacattcgatgaacttaacaga
atgaattatagtgatctagttgaattaataaaaacaataagttatgaaaacgtaccagac
ttatttaattttaatgatggttcatatactttctttagtaatagagatcgtgtacaagct
ataatatatggtctagaggatagtggaagaacttatacagcagatgatgataagggaatt
ccaactttagttgagtttttaagagctggatattatttaggattttataataaacaatta
tcatacctaaatacaccgcagttaaaaaatgagtgtttaccagctatgaaagcgattcaa
tataatagtaattttagattaggaacaaaggcgcaagatggagttgttgaggctttagga
agacttataggtaatgcttcagcagatccagaagttattaataattgcatatatgtttta
agtgattttaaagataatatagataagtatggttctaactatagcaaggggaatgcagta
ttcaaccttatgaaaggtattgattattatactaattcagtaatatacaatactaaggga
tatgatgctaaaaacactgagttctataatagaatagatccatatatggaaagattagaa
agtttatgtacaataggtgataagttaaataatgataatgcttggcttgtaaataatgcc
ttatattacacaggtaggatgggtaagtttagagaagacccatcaatatctcaaagagct
ttagaaagagctatgaaagagtatccttatttatcatatcaatatattgaagctgccaat
gacttagatttaaattttggtggaaaaaattcatcaggaaatgatatagatttcaataag
ataaaagcagatgcaagggaaaaatatcttccaaaaacatatacttttgatgatggcaaa
tttgtagtaaaagctggtgataaagtaacagaagagaagataaaaagattatactgggct
tcaaaggaagttaaggctcaattcatgagagtagttcaaaatgataaggctttagaagag
ggaaatccagatgatattttaactgttgttatttataactcaccagaagagtataagtta
aatcgtataataaatggatttagtactgataatggtggtatatatattgaaaacatagga
actttctttacttatgaaagaacaccagaggaaagtatatatacattagaagaattattc
cgtcatgaatttactcactatcttcaaggtagatatgtagttcctggaatgtggggacaa
ggagaattctatcaagagggagttttaacttggtatgaagaaggaacagcagagttcttt
gctggttcaactagaactgatggaataaaaccaagaaaatcagttacacaaggattagct
tacgatagaaataatagaatgtctttatatggtgtattacatgctaaatatggctcatgg
gatttctataattatggatttgctctatcaaactacatgtacaacaataacatgggaatg
tttaataagatgacaaattacataaagaataatgatgtatctggttataaagattatatt
gcatcaatgagtagtgattacggattaaatgataaatatcaagactatatggattcttta
ttaaacaatattgataacttagatgttcctttagtttcagatgaatatgtaaatggacat
gaagctaaggatataaatgaaataactaatgatataaaagaagtttcaaatataaaagat
ctttctagtaatgttgaaaagtctcaattctttactacttacgatatgagaggaacatat
gtagggggaagaagtcaaggggaagaaaatgactggaaagatatgaattctaagttaaat
gatatattaaaagaattatctaaaaagagctggaatggttataaaacagttactgcatac
tttgtaaatcataaagtagatggaaatggtaactatgtttatgatgttgtattccatgga
atgaatacagatacaaatactgatgttcatgttaataaagaacctaaagctgttataaaa
tctgattcttcagtaatagttgaagaagaaataaactttgatggaacagagtcaaaggat
gaagatggtgaaatcaaagcttatgaatgggactttggagatggagaaaaatctaatgag
gctaaagctactcataagtataataaaactggagaatatgaagtaaaattaacagttaca
gataataacggtggaataaatactgaaagtaaaaagataaaagtagtagaagataaacct
gttgaagttataaatgaaagcgagcctaacaatgattttgaaaaggctaaccaaatagct
aaatctaatatgttagttaagggtactttatcagaagaggactattcagataaatattat
tttgatgtagctaaaaaaggcaatgttaaaatcactcttaataatttaaattcagtagga
ataacttggacactttataaagagggcgacctaaacaattatgttttatatgcaactgga
aatgatggaacagtattaaagggtgaaaagactttagaacctggaagatactatttaagt
gtatatacttatgataatcaatcaggaacttacacagtaaatgtaaaaggaaaccttaaa
aatgaagttaaagaaacagcaaaggatgctataaaagaagttgaaaataacaatgatttt
gataaagctatgaaagtagacagtaatagcaaaatagttggaacattaagcaatgatgat
cttaaggatatttatagcatagatatacaaaatccaagtgacttaaacatagtagttgaa
aacttagacaatataaaaatgaactggttattatattcagctgatgatttaagtaactat
gtggattacgctaatgcagatggaaataaattaagcaacacttgtaagttaaatccgggt
aaatattacttatgtgtttatcaatttgaaaactcaggtactggaaactacatagtgaat
ttacaaaacaaataa
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