Clostridium perfringens 13: CPE0215
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Entry
CPE0215 CDS
T00074
Name
(GenBank) probable exonuclease
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cpe
Clostridium perfringens 13
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpe03400
]
CPE0215
DNA repair and recombination proteins [BR:
cpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CPE0215
Archaeal homologous recombinant proteins
CPE0215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
GTA_TIM
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
BAB79921
UniProt:
Q8XNW7
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Position
282313..283536
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AA seq
407 aa
AA seq
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MRILHTADWHLGKNLEGLSRMDEQERFLEDFVHIVKDNNIDLVIIAGDVYDSSNPPARAE
KMFYDTLKKISANGERMTLVISGNHDNPERLVAAGPLAREHGIIMVGTPKSIVEVGEYGR
NKVLNSGEGFIELDINGEKSVILTVPYPSEKRLNEVLYGAMDETCERIKSYSDRIKLLFD
SLKGNFKEDTINLVVSHLFATGAENTGSERNIELGGSFIVDKECFPKEAQYIALGHIHKP
MILPGTNKKIRYAGSPLQYNKKEISFEKKCFIVDVKANEEANIDEIKFDVYKPIEVWKCD
SIDEAIYKCEENKDRECWVYLEIKTDRYIREDEIKAMKKLKRDIIEIIPKITLDEEENDE
RSFSEKSFEELFTDFYEKERGVKPEEDLLELLLNIVKEEGDEENETN
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaggatacttcacactgctgattggcatttaggaaaaaacttagaaggattaagtcgt
atggatgagcaagaacgatttttagaggattttgttcacatagtaaaggataataatata
gatttagttattatagcaggggatgtatatgattctagtaatcctccagctagggcagaa
aaaatgttttatgataccttaaaaaagatatcagctaatggagagaggatgactttagtt
atttcagggaaccatgataatccagaaagattagtggctgcagggcccttagcaagagaa
catggaataatcatggttggaactcctaagagtatagttgaagtaggggaatatggaaga
aataaagttttaaattcaggagaaggatttattgaattagatataaatggagaaaagtct
gtaatattaactgttccatatccaagtgaaaagagattaaatgaagttttatatggtgca
atggatgaaacttgtgagagaataaaaagttatagtgatagaataaagcttttatttgat
tctcttaaaggaaattttaaagaagatacaattaatttagtagtatctcatctttttgca
acgggagcagaaaatactggttcagagagaaatatagagcttggaggaagtttcattgtt
gataaggaatgttttccaaaagaagcccaatatattgccttagggcatatacacaagcct
atgattctaccaggaactaataaaaagataagatatgcaggttcaccacttcaatataat
aaaaaagaaataagctttgaaaaaaagtgttttattgtagatgttaaagcaaatgaggaa
gcaaatatagatgaaataaaatttgatgtgtacaagcctatagaagtttggaagtgtgat
agcatagatgaagccatttacaaatgtgaagaaaataaagatagagaatgttgggtttat
ttagaaataaaaacagatagatatataagagaagatgaaataaaggccatgaagaagctt
aaaagggatattattgaaattattcctaagataacactagatgaagaggagaatgatgaa
agaagtttttcagaaaaatcttttgaagaattattcactgacttttatgaaaaggaaaga
ggggttaagccagaggaagatttattagagcttttacttaatatagttaaagaggaaggg
gatgaagaaaatgaaaccaattaa
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