Clostridium perfringens 13: CPE0360
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Entry
CPE0360 CDS
T00074
Name
(GenBank) DNA polymerase III, subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpe
Clostridium perfringens 13
Pathway
cpe03030
DNA replication
cpe03430
Mismatch repair
cpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPE0360
03430 Mismatch repair
CPE0360
03440 Homologous recombination
CPE0360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpe03032
]
CPE0360
03400 DNA repair and recombination proteins [BR:
cpe03400
]
CPE0360
Enzymes [BR:
cpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPE0360
DNA replication proteins [BR:
cpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPE0360
DNA repair and recombination proteins [BR:
cpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPE0360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
VMR2
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAB80066
UniProt:
Q8XNH3
LinkDB
All DBs
Position
457313..460891
Genome browser
AA seq
1192 aa
AA seq
DB search
MGDKKFCHLHLHSGYSLLDGSGKIKPLIKRAKELGMESIALTDHGVMYGCVDLYKEAKAE
GIKPILGCEVYVVPKSRKIKSNDEDNKTYHLVLLVKNEKGYENLMKIVSVASIEGFYYKP
RIDREYLKEHSEGIIALSACLGGEVQKAILNGNIDKAREAAIFYRDTFKDGFYLELQNHG
IEEQKKVNEVNIQLAKELNIPLVATNDVHYINQEDSKAHDILMCIQTGKTVDDPNRRRYP
SDQFYLKSPEEMWDMFDYIPEALENTLKIAEECNFDYEFHVSKLPKFPLPEGVEPFEYLR
KTCFDGLIDRLEELKPLKEKGIYDIDKVYEIGENNDKVKEDIERLEYELGVIKQMGYVDY
FLIVWDFIKYANDNGIPTGPGRGSAAGALVAYTLGITKIDPMKYSLLFERFLNPERVSMP
DIDSDFCYEGRQRVIDYVVEKYGHDNVSQIITFGTMAARACIRDVGRAMNYTYAEVDRIA
KQIPTVLGVTIDKALDLNPELKTIYDTEERVRELIDVSRRLEGLPRHSSTHAAGVVIASQ
PLVEYVPLQKNDESIVTQFDMTTLEELGLLKMDFLGLRTLTVMRDAVDMIKYNRGVDIDL
DNLDFDDKEVYKMIGEGNTVGVFQLESAGMTSFMKELKPDCLEDIIAGISLYRPGPMAEI
PRYISGKRDPKSVEYIVPELENILNVTYGVMVYQEQVMEIVRKLAGYSMGRSDLVRRAMS
KKKHKVMEEERKNFIYGIEDENGNIEVPGCLRNGISAEAANKIFDSMMDFASYAFNKSHA
AAYAVIGFQTAYLMRYYPVEFLAAMLNSVMGNSDKVSEYIRSAEKLGIQVLPPDINESYT
KFTVKGDTIRFGMGAIKNVGVNVVENIAKSRDEKGKFTSLMDFCNKIDLSIVNKRSVESL
IKAGTFDSLKVYRSQLLSVFEKIMDGVYSQRKKNIDGQMSLFGALQEESESNLEIRYPNI
KEFNKKYMLAMEKEMTGLYMSGHPLDDYEKPLKEQTSITIEKIIEAQKNLNEQKNVELED
LVLDSSLTDGTRVIIGGILTNVSRKVTRNNTLMAFAKVEDLTGYLECVIFPKTLEKCNAL
VNEDSFVLIRGRVSLKEDEEPKILCEDIQPLELINSSKVYIKVEDREKANMIVKPLRVLL
SQYKGDSPVYIFAAKEKASFRLNRDMWVDLDTDVIDFLISKFGEGNVKVVEG
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atgggggataagaagttttgtcacttgcatctacactctgggtatagtttgcttgatggt
tctggaaaaataaagccacttattaaaagggcaaaggaacttggaatggaaagtatagca
ttaactgaccatggtgttatgtatggatgtgttgacttatataaagaagctaaggcagaa
ggaataaaacctatcttaggatgtgaagtttatgttgtgcctaagtctagaaagataaag
agcaatgatgaagataataaaacatatcacttagttcttcttgttaagaatgaaaaggga
tatgagaaccttatgaaaattgtttctgtagcatctattgaaggattttattataaacca
agaattgatagagaatatttaaaagaacattcagagggaataatagccctaagtgcttgt
cttgggggagaagttcaaaaagctattttaaatggaaatatagataaagcaagagaagct
gcaatattctatagagatacatttaaggatggattttacttagaacttcaaaatcatgga
atagaagagcaaaaaaaggttaatgaggtaaatatacagttagctaaagaacttaatatt
cctttagttgcaactaatgatgttcactatataaatcaggaagattcaaaggcacatgac
atacttatgtgcatacaaactggaaaaactgtggatgatccaaatagaagaaggtatcct
tctgaccaattctatttaaagtcaccagaggaaatgtgggatatgtttgattacattcca
gaagctttagaaaatacattaaagattgcagaagaatgtaattttgattatgaattccat
gtttcaaagcttccaaagttcccacttccagaaggggtagagccttttgaatatctaaga
aagacttgctttgatggtcttatagatagattagaagaacttaaacctcttaaggaaaag
ggaatatatgatatagataaggtttatgaaattggtgagaataatgataaggtaaaagaa
gatatagaaaggcttgaatatgagcttggagtaatcaagcaaatgggatatgttgattac
ttcctaatagtttgggatttcattaagtatgccaatgataatggaataccaactggtcca
ggaagaggatcagcagctggagccttagttgcctataccttaggaataacaaaaatagac
cctatgaaatacagcttactctttgaacgtttccttaatccggagagagtaagtatgcca
gatatagactctgacttctgttatgagggaagacaaagagttatagactatgttgttgag
aagtatggtcacgacaatgtatcacagattataacttttggaacaatggcagcaagagct
tgtattagggatgtaggtagagctatgaattacacttatgcagaggttgatagaatagct
aaacaaatacctacagttcttggggtaacaatagataaggctttagatttaaatccagag
cttaaaacaatatatgatactgaagagagagtaagagaacttattgatgtaagtagaagg
ctagaagggcttccaagacattcatcaactcacgctgcgggagtagttatagcttctcag
cccttagttgagtatgtcccacttcaaaaaaatgatgaatccattgtaactcaatttgat
atgacaacccttgaggaacttggtttattaaaaatggactttttaggccttaggacctta
actgttatgcgtgatgctgtggatatgatcaagtataacaggggagtagacatagattta
gataatttagactttgatgataaagaagtttataaaatgattggtgaaggaaatacagta
ggggtattccagttagagtcagcaggaatgacttctttcatgaaagagcttaagccagac
tgtttagaggatattatagcgggaatatcattatatagaccaggtcctatggcagaaata
ccaagatatataagtggtaaaagggatccaaagtcagtagaatatatagttcctgaactt
gaaaatatattaaatgtaacctatggggttatggtttatcaagagcaggttatggagatt
gttagaaaattagcaggatattccatgggcagaagtgaccttgttagaagagctatgtct
aagaaaaagcataaggtcatggaagaagagagaaagaacttcatttatggaattgaagat
gaaaatggaaatatagaggttccaggttgcttaagaaatggtatttcagctgaggcagct
aataaaatatttgactctatgatggattttgcatcctatgcatttaacaaaagtcatgct
gctgcctatgccgtaataggattccagacagcttatcttatgagatattatccagtagag
tttttagctgctatgcttaactctgttatgggtaacagtgataaggtatctgaatatata
agaagtgcagaaaagcttggaattcaggtattaccaccagatataaacgagagttatact
aagtttacagttaagggtgatactataagatttggtatgggagctataaaaaatgtaggg
gtaaatgttgtagaaaacatagctaaatcaagagatgaaaagggtaaattcacttccctt
atggatttttgcaataaaatagacttaagtattgtaaataaaagatcagtagaaagttta
ataaaagctggtacatttgatagcttaaaggtttatagatcacaattactatctgttttt
gaaaaaataatggatggagtatattctcagagaaagaaaaatatagatgggcaaatgtca
ttgtttggagcacttcaagaagagagtgaatcaaacttagaaataagatacccaaacata
aaggaattcaacaagaaatatatgcttgctatggaaaaggaaatgacaggactttatatg
agtggtcatccactagatgattatgaaaagcctttaaaggagcaaacatcaataactata
gaaaaaataatagaagctcaaaagaatttaaatgagcaaaaaaatgttgaattagaagat
ttagtcttagacagttctttaactgatggaactagagtaattatagggggaattcttact
aatgtttctagaaaggtaactagaaataatactcttatggcatttgcgaaggtagaggac
ttaactggctatttagaatgtgttatcttccctaaaaccttagaaaaatgtaatgcacta
gtaaatgaggactcctttgttttaataaggggaagagtttctctaaaggaagatgaggag
ccaaaaatactttgtgaagatatacaaccactagaattaataaattcttcaaaggtgtat
ataaaggttgaagatagagaaaaagctaatatgatagttaagcctttaagagttttatta
tcacaatataaaggtgattctccagtttatatatttgcagcaaaggaaaaagcatctttt
agattaaacagagatatgtgggttgatttagatacagatgtaatagactttttaattagc
aaatttggagaaggaaatgtaaaagtagttgaaggttaa
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