Clostridium perfringens 13: CPE0526
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Entry
CPE0526 CDS
T00074
Name
(GenBank) probable ABC transporter
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cpe
Clostridium perfringens 13
Pathway
cpe02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CPE0526
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cpe02000
]
CPE0526
Transporters [BR:
cpe02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
CPE0526
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
DUF1418
AAA_29
DUF3091
Motif
Other DBs
NCBI-ProteinID:
BAB80232
UniProt:
Q8XN12
LinkDB
All DBs
Position
652622..654919
Genome browser
AA seq
765 aa
AA seq
DB search
MSKLIKYLKPFTASILAVIVLLFAQAMFDLSLPDYMSNIVNVGIQQGGIENAVPKVISKS
EFDKLTLFMSKDEKEKVESNYTLLDKGTLSQSEYDEYVKDYPALEKENICKLNTKDKEII
NELNPIMGKAMIVVGGIEEKGLQGVMGNSSLTGASDNSKANMEESAPKEGQIQGMPANTD
PFFMIKNMPEAQKNDMLKQINEKFESMPESMVTQTAATFIKAQYTDLGMNIEKIQSQYIL
KTGGIMILLAFGSMIAAVSVTLIAARVAAGFGRNLRSKVFGKVVRFSNAEFDKFSTASLI
TRSTNDIQQIQTLMVLLLRIVFYAPILGLGGIFRVVKTDTGMSWIIAVALAAILSLVIVL
FGLAIPKFKLVQKLVDKLNLVARESLTGMLVIRAFNTEKYQENKFDGVNKDLTRTNLFVS
RIMGGMMPLMMLIMNLITILIVWVGAHNVNDGVMQVGDMMAFIQYTMQIIMAFLMISMVS
VMLPRASVSGQRIAEVLETKESIKDPEKNDEFNKNKKGYVEFKNVSFKYPGAEEYVLKDI
SFTAKPGETTAFIGGTGSGKSTLVNLIPRFYDVTEGEILVDGTDIRKVSQHDLREKIGYV
PQKGILFSGTIESNLKYGNEDALLEELEEAANIAQASEFINTKALKYAEEISQGGTNVSG
GQKQRLSIARALVKNPDVYIFDDSFSALDFKTDAAVRKALNDKTSHSTMLIVAQRISTIM
GANQIIVLDEGKIVGKGTHKELLENCEVYKQIALSQLSKEELSNE
NT seq
2298 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaagctaattaaatacttaaaaccatttacggcatcaattttagctgttatagta
cttctttttgctcaggcaatgtttgatttatctttaccagattacatgtcaaacatagtc
aatgtaggaattcagcaaggtggtatagaaaatgctgttccaaaagtaattagtaaatca
gagtttgataaactgacactttttatgagcaaagatgaaaaagaaaaagtagaaagcaat
tatacgttgttagataaaggtactctatctcaaagtgagtatgatgaatatgtaaaagat
tatccagctttagagaaggagaatatttgtaaattaaatactaaagataaagagataatt
aatgaattaaatcctattatgggtaaggcaatgatagttgtaggtggaattgaagaaaaa
ggcctacaaggagtaatgggaaattcatctcttacaggagcttctgataattccaaggct
aatatggaagaaagtgctcctaaagaaggacaaatacaaggaatgcctgctaatacagat
ccattctttatgattaagaatatgccagaggcacaaaagaatgatatgcttaagcaaatt
aatgagaaatttgaaagtatgccagagagtatggttactcaaacagcggctacttttatt
aaagctcaatatactgatttaggcatgaatatagagaagatacaaagtcaatacatacta
aaaactggaggaataatgattcttttagcctttggaagtatgattgcagcggtatcagta
acattaatagccgcaagagtggcagcaggatttggaagaaatcttcgtagtaaagttttt
ggaaaagttgttagattttcaaatgcagaatttgataaattttcaacagcttcccttata
actcgtagtacaaatgatattcaacaaatacaaactcttatggttctgcttcttagaata
gttttttatgcacctatcttaggtctaggaggtatttttagagttgtaaaaacagatact
ggaatgtcatggataatagctgtagccttagctgctatactttctttagtaatagtttta
tttggacttgctattccaaaattcaagttagttcaaaagctcgttgataaacttaactta
gtagctcgtgaatcacttacaggaatgttagtaatccgtgcctttaatacagaaaaatat
caagaaaataagtttgatggtgtaaataaagatcttactagaacaaatctttttgttagt
agaataatgggtggaatgatgccacttatgatgcttataatgaaccttataactattctt
atagtatgggttggtgctcataatgtaaatgatggagttatgcaagttggggatatgatg
gcatttattcaatacacaatgcaaatcataatggcattcttaatgatatctatggtatca
gtaatgcttccaagagcatcagtttcaggtcaacgtatagctgaggttttagaaactaaa
gaaagcataaaagatcctgaaaagaatgatgagtttaataaaaataaaaaaggatatgtt
gaatttaaaaatgtttcatttaaatatcctggtgcagaggaatatgttttaaaagatatt
tcatttactgcaaagcctggtgaaacaactgccttcattggaggaactggtagtggtaaa
tctactttagttaatttaataccacgtttctatgatgttacagaaggtgaaattttagtt
gatggaacagatataagaaaagtttctcaacatgatttaagagaaaaaataggatatgtt
cctcaaaagggaatattattctcaggtactatagaaagtaacttaaaatatggtaatgag
gatgcacttttagaagaattagaagaggctgcaaatattgctcaagcttctgaatttata
aatactaaagctttaaaatatgcagaggaaatttcacaaggtggtactaacgtatctggt
ggacaaaaacaaagactttcaattgctagagctttagtaaagaatcctgatgtatatatt
tttgatgatagtttctcagctcttgactttaaaacagatgcagctgttagaaaagctctt
aatgataaaacatcacatagtacaatgcttatagttgcacaaagaataagcacaattatg
ggagctaatcaaataatcgtacttgatgaaggtaagattgttggtaagggaactcataaa
gaacttctagaaaattgtgaggtttataagcaaatagctttatctcaactttcaaaggag
gagctaagtaatgagtaa
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