Clostridium perfringens 13: CPE0553
Help
Entry
CPE0553 CDS
T00074
Name
(GenBank) exo-alpha-sialidase
KO
K01186
sialidase-1 [EC:
3.2.1.18
]
Organism
cpe
Clostridium perfringens 13
Pathway
cpe00511
Other glycan degradation
cpe00600
Sphingolipid metabolism
cpe01100
Metabolic pathways
cpe04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
CPE0553
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
CPE0553
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
CPE0553
Enzymes [BR:
cpe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
CPE0553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sialidase
F5_F8_type_C
BNR_2
BNR_3
F5_F8_type_C_2
fn3
BNR
Laminin_G_3
fn3_2
DUF5000
CBM_AftD
RGI_lyase
FN3_Tor_3rd
Motif
Other DBs
NCBI-ProteinID:
BAB80259
UniProt:
Q8XMY5
Structure
PDB
PDBj
LinkDB
All DBs
Position
681830..685351
Genome browser
AA seq
1173 aa
AA seq
DB search
MKSKKIIATLVASLVISNMGGYLVKANPNVNHKAVIIEDRQAIIETAIPQSEMTASATSE
EGQDPASSAIDGNINTMWHTKWNGSDALPQSLSVNLGKARKVSSIAITPRTSGNNGFITK
YEIHAINNGVETLVAEGTWEENNLVKTVTFDSPIDAEEIKITAIQGVGGFASIAELNVYE
IKGEVDEIANYGNLKITKEEERLNITGDLEKFSSLDEGTIVTRFNMNDTSIQSLIGLSDG
NKANNYFSLYVSGGKVGYELRRQEGNGDFNVHHSADVTFNKGINTLALKIEKGVGAKIFL
NGSLVKTVSDPNIKFLNAINLNSGFIGKTDRANGYNEYLFRGNIDFMNIYDKPVSDNYLL
RKTGETKAPSEDSLLPDDVYKTQPVELFYPGYLESRGYRIPALETTKKGTVLASIDVRNN
GDHDAPNNNIDVGIRRKEVNGEWEEGKVILDYPGKSAAIDTSLMSATIEENGIEKERIFL
IVTHFPEGYGFPNTEGGSGYKEIDGKYYFILKDAQNNEYTVREDGIVYNSEGNQTDYVMK
NDKTLIQNGEEVGNALLSNSPLKAVGTAHIEMIYSDDDGKTWSEPEDLNPGLKKEWMKFF
GTAPGKGIQIKNGEHKGRLVFPIYYTNQNNFQSSAVIYSDDFGETWKLGESPIDTASVSS
ETVSSGTQLTECQVVEMPNGQLKLFMRNTGSYTKIATSFDGGATWHDEVPEDTSLREPYC
QLSVINYSGKINGKDAIIFSNPDASSRVNGSVKVGLINENGTYDNGEPRYEFDWIYNKTV
KPGSFAYSCLTELPDGNLGLFYEGEGAGRMAYTEFDLNYLKFNASEDSPSASVQSIEVLD
EDLAYNSGEEVSIKVNFNQLVSIIGDRKITLDIGGVDVPLNMVNYEGKSSAIFKGTIPEG
INQGNYEIKLKENNTLELNTVYNKVSTFNGLDNTGINVQIGELKTTVGNSTIKVNDEVQV
GSAFEAILGIEGLNGDTEVYSAEYLFEYNVEAFILNEITSFNDSLFVKSKEVEPGKVRIL
VASLGNEIEKDSDLVKVNLTPKISSELEVLGLTTALVGAGDGNTHDLELSSKEVKINEEA
SGEIVVNPVQNFEIPEINKKNVKLTWNAPITTEGLEGYVIYKDGKKLSEVPAESTEFVVS
KLNRHTIYNFKVAAKYSNGELSAKESKTIRTAR
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaagtaaaaaaattatagctacacttgttgcaagtttagttatttctaatatggga
ggatatttagtaaaagctaatcctaatgtaaatcataaggcagttattatagaagataga
caagctattattgaaactgctattccacaatcagaaatgacagctagtgcaacttcagaa
gagggccaagatccagcttcaagtgctattgatggaaatataaatactatgtggcataca
aaatggaatggtagtgatgcgcttccacagagtttatcagtaaacttaggaaaagctaga
aaagttagttctatagctattacaccaagaacaagtggaaacaatggatttataactaag
tatgaaattcatgctattaataatggagtagaaactttagttgcagagggaacatgggaa
gaaaataatttagttaaaactgtaacttttgattctcctattgatgcagaagagataaaa
ataactgcaattcaaggtgttggtggatttgcttcaatagcagagttaaatgtttatgaa
atcaaaggcgaagtagatgaaattgccaactatggaaacttaaaaataactaaggaggaa
gaaagattaaatataactggtgatttggaaaaattctcctcactagatgaaggaactata
gtaactagatttaatatgaatgatacctcaattcaaagtttaattggtttaagtgatgga
aataaagcaaataactatttttcactttatgtaagtggaggaaaagtaggatatgagctt
agaagacaagaaggaaatggagattttaatgtacatcacagtgcagatgttacttttaat
aaaggaataaatactttagctttaaaaatagaaaagggagtaggagctaagatattttta
aatggttctctggttaaaacggtatcagatccaaatattaaatttttaaatgcaataaat
cttaatagtggatttattggtaaaactgatagagcaaatgggtacaatgagtacttattt
agaggaaatatagattttatgaatatttatgataaaccagtaagtgataattatttgtta
agaaaaacaggggaaactaaggcgccatcagaggatagtttattgccagatgatgtttat
aaaacacaaccagtagaattattctatcctggatatttagaatcaagaggatatagaatt
cctgctttagaaacaactaaaaaaggaacggttttagcttctatagatgttagaaataac
ggagatcatgatgctcctaataataacatagatgtaggtataagaagaaaagaagtaaat
ggggaatgggaagaaggaaaagtaatattagattatccaggtaaatcagcagctatagat
acttctcttatgtcagctaccatagaagagaatggaattgaaaaagagagaatatttctt
atagtaactcatttcccagaaggttatggattccctaatacagagggcggaagtggatat
aaagaaattgatggaaaatattattttatattaaaagatgctcaaaataatgaatataca
gttagagaagatggaattgtttataattcagaaggaaatcaaactgattatgtaatgaaa
aatgataaaacccttattcaaaatggagaagaagttggaaatgctttactaagcaattct
ccacttaaggcagttggaactgctcatattgaaatgatttatagtgatgatgatggtaaa
acatggagtgaaccagaggatttaaatccaggacttaagaaagaatggatgaaattcttt
ggaactgcaccaggaaagggaattcaaataaaaaatggagagcataaaggtcgattagta
ttcccaatatactatactaatcaaaataatttccaatcaagtgctgtaatttatagtgat
gactttggtgaaacttggaagttgggagaatctccaatagatacagcttctgtaagctct
gaaacagtttcttcaggaacacagttgacagagtgccaagtagttgaaatgccaaatgga
caactaaaattatttatgagaaatactggttcatatacaaagattgcaactagttttgat
ggaggagcaacatggcatgatgaagttccagaagatacttctttaagagagccttattgt
caattaagtgttataaattatagtggaaaaataaatggtaaagatgcaattatattctca
aatccagatgcaagtagtagagtaaatggaagtgttaaggttggcttaataaatgagaat
ggaacttatgacaatggagaaccaagatatgaatttgattggatttataataaaacagtt
aagccaggttcatttgcttattcttgtttaacagagttaccagatggaaacctaggatta
ttctacgagggtgaaggggcaggcagaatggcatatactgaatttgatttaaattacctt
aagtttaatgcttctgaagattcaccatcagcttcagttcaatcaattgaagttttagat
gaagatttagcttacaattctggagaggaagtttcaataaaagtaaactttaatcaatta
gttagtatcataggagatagaaagataactttagatataggtggagtagatgtaccacta
aatatggttaattatgaagggaagagctcagctatatttaaaggaactataccagaagga
attaatcaaggaaattatgaaataaagcttaaagaaaataatactttagaacttaatact
gtttataataaagtttcaactttcaatggattagataatacaggaattaatgtacagatt
ggtgaattaaaaacaactgttggaaattcaaccataaaggttaatgatgaagttcaagtt
ggctcagcatttgaagctatattaggaattgaaggattaaatggagatacagaagtgtat
tcagcagaatatttatttgagtataatgtagaagcatttatattaaatgaaattacttca
tttaatgattctttatttgtaaagagtaaagaagttgaaccaggaaaagttagaatatta
gtagcttctttagggaatgaaatagaaaaagattcagatctagtaaaagttaacttaact
ccaaagatttcttctgaattagaagttttaggattaacaacagctttagtaggagctgga
gatggaaatactcatgacttagaactttcaagtaaggaagttaaaattaatgaagaagct
tcaggagagatagtagtaaatccagtacaaaattttgaaattccagaaataaataagaaa
aatgttaaattaacatggaatgctccaataacaactgaggggttagagggatatgtaata
tataaagatggaaagaaattatcagaagttccagctgaatctacagagtttgtggtttca
aaattaaatagacatactatttacaattttaaagttgcagctaaatattcaaatggagaa
ctttcagctaaagaaagtaagactataagaactgctaggtaa
DBGET
integrated database retrieval system
