Clostridium perfringens 13: CPE0563
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Entry
CPE0563 CDS
T00074
Name
(GenBank) probable transcriptional regulator
KO
K03486
GntR family transcriptional regulator, trehalose operon transcriptional repressor
Organism
cpe
Clostridium perfringens 13
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpe03000
]
CPE0563
Transcription factors [BR:
cpe03000
]
Prokaryotic type
Helix-turn-helix
GntR family
CPE0563
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_11
HTH_36
HTH_DeoR
Fe_dep_repress
Rrf2
HTH_41
TrmB
HVO_A0261_N
HTH_45
HTH_Crp_2
WHD_RNase_R
HTH_5
HTH_24
MarR_2
LexA_DNA_bind
DUF4423
HTH_29
Motif
Other DBs
NCBI-ProteinID:
BAB80269
UniProt:
Q8XMX5
LinkDB
All DBs
Position
699647..700354
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AA seq
235 aa
AA seq
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MSSKYLKIYNDIVGKIDSGIFEANTKLPSESQLMDEYNVSRDTVRKSLNLLEQNGYIEKS
KGKGSFVLDMNKFDFPVSGIKSFKEIENSLGKECETILEELTLKSPSDSLMKKLEVSPNK
YVWSVVRVRNIDGEKIILDKDYLNSEFVPRLTEEICKDSLYKYIEGELGLKIAYAEKEIT
VQTATEEDQRLLDLRGYDMVAVVKSYTYLEGRKLFQYTESRHRPDKFKFVDFARR
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgtctagtaagtatttaaaaatatataatgatattgttgggaaaatagatagtggaatt
tttgaagcgaatactaaattaccttcagagtcacaacttatggatgaatataatgtatct
agagatactgtaagaaaatccttgaatttattagagcaaaatggatatattgaaaagtct
aaaggtaagggatcttttgtacttgatatgaataaatttgattttcctgtgtcaggtata
aagagttttaaagagattgaaaatagcttaggaaaagagtgcgaaactatattagaggaa
ttaacattaaaaagtcctagtgatagccttatgaaaaaactagaggtttctcctaataaa
tatgtttggagtgtagtaagagttagaaatatagatggtgaaaagataattttagataag
gactatttaaattcagagtttgttccaagacttacagaagaaatatgcaaggattcttta
tataaatatatagagggagaattaggattaaaaatagcctatgctgaaaaagaaataaca
gtacaaactgctactgaggaagatcaaagacttttagatttaagaggatatgatatggta
gctgtggttaaaagctatacatatttagaaggaagaaaattatttcaatatacagagtca
agacatagaccagataaatttaagtttgtagattttgcaagaagatag
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