Clostridium perfringens 13: CPE1401
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Entry
CPE1401 CDS
T00074
Name
(GenBank) probable DNA polymerase III epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpe
Clostridium perfringens 13
Pathway
cpe03030
DNA replication
cpe03430
Mismatch repair
cpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPE1401
03430 Mismatch repair
CPE1401
03440 Homologous recombination
CPE1401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpe03032
]
CPE1401
03400 DNA repair and recombination proteins [BR:
cpe03400
]
CPE1401
Enzymes [BR:
cpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPE1401
DNA replication proteins [BR:
cpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CPE1401
DNA repair and recombination proteins [BR:
cpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CPE1401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
BRCT
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
BAB81107
UniProt:
Q8XKJ3
LinkDB
All DBs
Position
complement(1652165..1653073)
Genome browser
AA seq
302 aa
AA seq
DB search
MDFVAIDFETANEKRNSACSIGLTVVKDNKIVEEKYFLIKPCEMRFQPMNIWIHGIRPED
VENERTFNEIWEEIKDYIDGNLVIAHNAAFDISVLRKTLDFYDIPYPDFEYACTVVMAKN
YYKSLPNHKLGTVSEALDFEFSHHHAGEDARACANILLNICKDLDIESVEELSDKLSIRI
GAVYENGYKSSGRKGECKYSSNLRLKEKKKEGEISLKCKNVVFTGPLSSMSRGEAIGNVI
RCGGFVSSSVSKKTNYLITGIRDLNKLKENEKSIKLKKAENLIKENFDIKIINEEEFLSI
IE
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggattttgttgcaatagactttgaaactgctaatgagaaaagaaatagtgcgtgttct
attggattgactgttgttaaggataataaaattgttgaagaaaaatattttttaataaag
ccttgtgaaatgagatttcagcccatgaatatatggatacatggaattagaccagaggat
gttgaaaatgagagaacttttaatgaaatatgggaagaaataaaggattacatagatgga
aatttagtaatagctcataatgcagcttttgatattagcgttcttagaaaaactttagat
ttttatgatataccttatccagactttgaatatgcctgtacagtagttatggcaaagaat
tattataaatcattaccaaatcataaattaggaactgtaagtgaagctttagactttgaa
ttttctcatcaccatgcaggggaagatgcaagggcttgtgctaacatattacttaatata
tgcaaagatttagatatagaatcagttgaagagctttcagataagctctccataagaata
ggtgctgtttatgaaaatggatataagtcttctggaagaaagggagaatgcaaatattca
agcaatttaagacttaaggaaaagaagaaagagggagaaatatctttaaaatgtaaaaat
gtagtttttacaggacctttaagctctatgtctagaggagaagccataggaaatgtaata
aggtgtggtggttttgtctcaagttctgtaagtaaaaagacaaactacttaattacagga
attagggatttaaataaattaaaagaaaatgaaaagagtattaaattaaaaaaagcagaa
aatttaataaaagaaaatttcgatattaagataataaatgaagaggaatttttatctata
atagaataa
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