Clostridium perfringens 13: CPE1683
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Entry
CPE1683 CDS
T00074
Name
(GenBank) tRNA-pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cpe
Clostridium perfringens 13
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpe03016
]
CPE1683
Enzymes [BR:
cpe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CPE1683
Transfer RNA biogenesis [BR:
cpe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CPE1683
Prokaryotic type
CPE1683
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Cas6b_C
Motif
Other DBs
NCBI-ProteinID:
BAB81389
UniProt:
Q8XJS1
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All DBs
Position
complement(1959710..1960594)
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AA seq
294 aa
AA seq
DB search
MNGVINIYKNTGMTSFDVVAMVRRVAKMKKVGHTGTLDPAASGVLPVCLGKATKIIDYIM
ENKKVYRVNLKLGMVTDTYDLEGEVLREEDASHITKDEILNCINSFVGTIDQVPPMYSAL
KQNGVRLYELARQGIEVHREARKITIYSIENIKIESNDNIQMDVCCSKGTYIRSLCYDIG
EKLNVGATMTALERIQNGTFTKEEAINIEDLTEELLEKHIISIEKALDSFEKITVNEKFG
KLLRNGVKVFDNRMYSEEVEFNKLYRVYEDNGVFLGLGKRDEKGFKLEKLLIEE
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagtaattaacatatataaaaatacgggaatgacttcatttgatgttgtggcc
atggtaagaagagttgcaaaaatgaaaaaggtaggacatacaggaactttagatccagcg
gcttctggagttttacctgtatgccttggaaaagctacaaaaattatagattatataatg
gaaaataaaaaagtttatagagtgaatttaaagcttggtatggttactgacacatatgat
ttagaaggagaagttttaagagaagaggatgcatcacatataacaaaggatgaaatatta
aattgtataaattcctttgtaggaacaatagatcaagttccaccaatgtattctgcttta
aaacaaaatggagtaagattatatgaattagcacgtcaaggaatagaagttcacagagaa
gctagaaaaattactatttattctattgaaaatataaaaatagaatcaaatgataatata
caaatggatgtttgttgttctaagggaacatatataagaagcctttgctatgatattggt
gaaaaattaaatgttggagcaacaatgactgccttagagagaatacaaaatggtacattt
actaaagaagaagcaataaatatagaagatttaacagaagaacttttagaaaaacatatt
atttccattgaaaaggctttagattcttttgaaaaaatcacagtaaatgagaagtttggt
aagcttttaagaaatggtgttaaagtatttgataatagaatgtatagtgaagaagttgaa
tttaataaactatatagagtatatgaagacaatggagtctttttgggattaggaaaaagg
gatgaaaaaggatttaaattggagaaattactgatagaggagtag
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