Clostridium perfringens 13: CPE1702
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Entry
CPE1702 CDS
T00074
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cpe
Clostridium perfringens 13
Brite
KEGG Orthology (KO) [BR:
cpe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpe03032
]
CPE1702
03400 DNA repair and recombination proteins [BR:
cpe03400
]
CPE1702
Enzymes [BR:
cpe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CPE1702
DNA replication proteins [BR:
cpe03032
]
Prokaryotic type
DNA Topoisomerases
CPE1702
DNA repair and recombination proteins [BR:
cpe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CPE1702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Zn_ribbon_recom
Toprim_4
Toprim_2
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
BAB81408
UniProt:
Q8XJQ4
LinkDB
All DBs
Position
complement(1980439..1982541)
Genome browser
AA seq
700 aa
AA seq
DB search
MGQKLVIVESPAKAKTIEKYLGKNYVVEASMGHVRDLPKSQLGVDIENEYNPKYITIRGK
GELLSKLRKLAKKSDKIYLATDPDREGEAISWHLANVLKIDENENCRIEFNEITKDAVKN
SIKHPRKINCNLVDAQQARRVLDRLVGYEISPLLWRNVKWGLSAGRVQSAALKLICDREE
EIKKFNPEEYWTVDVKLKKGKKSFPVKLTTKNKKKIEIKNKEQADQIIDELKENEYIVSK
IKKGTKNKNPLAPFTTSTLQQEASKKLNFMTKKTMSVAQQLYEGVEVKKFGTVGLITYMR
TDSVRISKEAQEKALNFIDETYGKEYVPEESRVYKGKKNIQDAHEAIRPTYVEITPEIAK
ANLSNDQYKLYALIWKRFIASQMATCILNTNSLEIKNGDYTLRASGSTIKFDGFMKVYEY
ISGEEEESVLLPELEENEVLKEESIEGKQHFTQPPARYSEAAFVKLLEEKGIGRPSTYVP
TISTLISRKYVDREKKILIPTELGFIVNDILSNYFKQIVDTDFTAEMEVKLDNVEAGKES
WTHIVDEFFTPLKEDIEKAEKEISKVIIEDKVSDVPCDKCGRLMVIKHGRFGDFLACPGY
PECQNTKPIVEEVDANCPLCGGKILVKRSKKGNRFYGCSNYPECNFVSWYEPTNEKCPEC
GSYMVKRYSKSKGEYLQCSDKECKYEKIIEKNNDENNSEK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaaaattagtaattgttgagtcaccagctaaagccaagacaatagaaaaatat
ttaggtaaaaattatgtagtcgaagcttccatgggacatgtaagagatttgccaaaaagc
caattaggcgttgatatagaaaatgaatataatcctaaatatataacaataagaggaaaa
ggtgaacttttaagcaaacttagaaagttagcaaaaaaaagtgataagatataccttgca
actgaccctgatagagaaggggaagctatatcttggcacttagctaatgtgcttaagata
gatgaaaacgagaattgtagaatagaatttaatgaaataacaaaggatgcagttaaaaat
tcaataaagcatccaagaaaaataaattgtaatttagtagatgctcagcaagcaagaaga
gtgttagacagattggttggatatgaaataagtccacttctatggagaaatgtaaaatgg
ggattgagtgctggaagggttcagtcagcagcattaaaacttatatgtgatagagaagaa
gaaataaagaagttcaatccagaagagtattggactgttgatgttaaacttaaaaaagga
aagaagtcttttcctgttaagttaacaactaaaaataagaaaaagatagaaataaaaaat
aaagaacaagcagatcaaataatagatgaacttaaagaaaatgaatatatagtaagcaag
ataaaaaaaggaactaaaaataaaaatcctttagctccttttactacaagtactcttcaa
caagaggcaagtaaaaagcttaacttcatgacaaagaaaacaatgtcagtagctcaacaa
ctttatgaaggggttgaagttaagaaatttggaactgtaggtttaataacttatatgaga
actgattctgttagaatctcaaaggaagctcaagaaaaagctcttaactttatagatgaa
acatatggaaaagagtatgttccagaggaatcaagagtatataaaggaaagaaaaatata
caagatgctcatgaagccataagacctacatatgttgaaataacaccagagattgctaag
gcaaacttaagtaatgatcaatataagttatatgctttaatatggaaaagatttatagca
agccaaatggctacatgtatattaaatactaatagcttagagattaaaaatggtgattat
acattaagagctagtggatctactataaaatttgatggattcatgaaagtttatgaatat
atatcaggggaagaggaagaatcagtacttttacctgaattagaggaaaatgaagtttta
aaagaagaatcaattgaaggtaaacaacattttactcaaccacctgctagatattcagag
gctgcttttgttaagcttttagaggaaaaaggtattggaagaccaagtacttacgttcca
acaatatctacattaataagtagaaaatatgtagatagagagaaaaagattcttatacct
acagaattaggctttatagtaaatgatatactttcaaattattttaagcagatagttgat
actgactttactgctgaaatggaagttaaacttgataatgttgaagccggaaaagaaagt
tggactcatatagtagatgaattctttactccattaaaggaggatatagaaaaggcagaa
aaagagatatctaaggttattatagaagataaagtcagtgatgtaccttgtgataaatgt
ggaagacttatggttattaagcatggaagatttggagatttcttagcttgtcctggatat
ccagagtgtcaaaacacaaaacctatagttgaagaggttgatgcaaactgtccattatgt
ggaggaaagattttagttaagagaagtaaaaagggaaacagattctatggatgtagtaat
tatccagagtgtaatttcgtaagttggtatgaaccaacaaatgaaaaatgtccagaatgt
ggttcatatatggttaagagatactctaagagtaaaggtgaatatttacagtgtagtgat
aaagaatgtaaatatgaaaaaataattgaaaaaaataatgatgaaaataactcagaaaag
tag
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